DRSC/TRiP Functional Genomics Resources

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Protein Alignment ppk28 and asic-2

DIOPT Version :9

Sequence 1:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_492099.1 Gene:asic-2 / 189058 WormBaseID:WBGene00012137 Length:545 Species:Caenorhabditis elegans


Alignment Length:521 Identity:112/521 - (21%)
Similarity:200/521 - (38%) Gaps:127/521 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 STLHGLKYIAEESITIPERIFFGLAFVLVVILSVFFISNVYVKWSASPIIISTSAKQKLTSNMPF 111
            ||:..:.::|..:..| .|||:...|:.|:.:..:.:..:..|:.:.|..::|   :.|.....|
 Worm    17 STVAVVPHVANANNKI-SRIFWIAIFLFVLGMFAYELYILIAKFFSYPATVNT---EILFEKQIF 77

  Fly   112 PAITICNLNQALLSKVDRIGRTSTNFSLLMGLCDQGGDTTISYIGT--WKYF------------- 161
            |.:|:||:|....|.|    ::::.||.:..|.....|.|:....|  |..:             
 Worm    78 PVVTVCNMNPYKYSVV----KSNSAFSSVNTLMTTYSDATVGTFSTDKWGLYADNDETYDLDSRA 138

  Fly   162 -KAILVD---VAQPCEKMLLYCSFGSREEDCSWL--------FTSILTD-DGLCCNFNALHPSYL 213
             .|::::   ::...:...|| ::....:|||:.        ||..:.. .|.|.:||       
 Worm   139 ADALVLEANLISDTAKVPALY-TYADLIQDCSFAGIPCSESDFTKFIDPVYGACYSFN------- 195

  Fly   214 IRNYSDDVRLETAHPNTRYELIDWTPEKGYARNLPEFYFPRTSGGTGIRMGLTVV---LNASIAE 275
                 :|..|                  .|:.:.....|       |:::.|||.   .|.:...
 Worm   196 -----EDASL------------------NYSVSREGIQF-------GLKLMLTVTQTKTNGNTDS 230

  Fly   276 YYCTKSMSVGFKVLVHNPAELPKVSNYGFVVTAGREARIPIEPVYEDALPTIRSIKKSVRRCLFS 340
            ...||  ..|.::.|::....|.:.:.|.....|.|:.:.:     .....:|: ||....|:..
 Worm   231 LPTTK--LAGARIGVNSRGSSPGLDSNGIDAGVGYESAVSV-----SLTQNVRA-KKPYGTCVDR 287

  Fly   341 DENDLAYYR--TYSRKNCELECEAKLLLRECSCVLYYLPRIDPLARVCGPNDNQC------TDRV 397
            :.:...||:  .|:.:.|...|:.:..:.:|.|.   .||:     ..|..|..|      .|.:
 Worm   288 EPDSSDYYKDFIYTLETCFNGCKQRDTIAKCQCA---NPRL-----ALGSTDTACQPIKADLDCL 344

  Fly   398 QT---EIESSLTNL----SCENCWPGCFELTYRATLSTASIVSDPRFQAGENLPEYIFHGPYSNA 455
            ||   ...||..|:    .| ||.|.|.|.||..|:|.|...|...:.|..:....   |..|:.
 Worm   345 QTLKGNQTSSTPNIDLLVEC-NCNPPCDESTYTPTVSLAQFPSTSYYVATSSTAGV---GSCSST 405

  Fly   456 ----SEISILHFYYMTN-----IFRSTTKSEMF----GFT--EFLSNTGGLLGLFMGFSIFSVIE 505
                |..|....:|..|     :|..|...|::    |:|  ..:::.||..||::|.|:.||:|
 Worm   406 NSKFSSKSDCQKWYNNNGMIIQVFLETLSYELYTETAGYTVSNVINDLGGQAGLWLGLSVISVVE 470

  Fly   506 I 506
            :
 Worm   471 M 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk28NP_573169.2 ASC 43..509 CDD:279230 112/521 (21%)
asic-2NP_492099.1 deg-1 12..474 CDD:273309 112/521 (21%)
ASC 13..471 CDD:279230 111/519 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7217
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.680

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