DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk28 and del-9

DIOPT Version :9

Sequence 1:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_508622.2 Gene:del-9 / 182767 WormBaseID:WBGene00015957 Length:579 Species:Caenorhabditis elegans


Alignment Length:626 Identity:129/626 - (20%)
Similarity:213/626 - (34%) Gaps:183/626 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 RTLTESRRRQSGSSGCKKDSESDDDENTICSRAAIKRSVVYYLK-NSTLHGLKYIAEESITIPER 65
            :||:   ||.||.|.....|....|.:::...:......:|.|: .||||||:     .:.:...
 Worm    44 KTLS---RRWSGRSRASTRSHDPTDASSLSDSSDDNDDSLYLLRETSTLHGLR-----DVMLSSS 100

  Fly    66 IFFGLAFVLVVILSVFF----ISNVYVKWSASPIIISTSAKQKLTSNMPFPAITICNLNQALLSK 126
            ....:.:||:|||::|.    ...:..::|...|::|...::  ..::..|.:.:|..|:...|.
 Worm   101 GRLRMVWVLIVILALFMTFQGCYQIMDEYSMRRIVVSYFIQE--AQSIWVPDVVVCPYNRLNRSF 163

  Fly   127 VDRIGRTSTNFSLLMGL-------------CDQGGDTTISYIGTWKYFKAILVD-----VAQPCE 173
            ::   ..:.:|.|...|             ..|..:..||.|.|..:...||::     .||...
 Worm   164 IE---ANNVSFELAQFLELSFPSMDLPFENIQQQQEEIISKIDTLDFQIEILLEQNNMTYAQFLR 225

  Fly   174 KMLLYC-SFGSREEDCSWLFTSILTDDGLCCNFNALHPSYLIRNYSDDVRLETAHPNTRYELIDW 237
            |..|.| :|......|: ..|.|:|..|.|.....:                      :.|:..:
 Worm   226 KASLNCEAFFEDSRRCA-NTTEIMTSAGKCFRMAGI----------------------KQEIAGF 267

  Fly   238 TPEKGYARNLPEFYFPRTSGGTGIRMGLTVVLNASIAEYYCTKSMSVGFKVLVHNPAELPKVSNY 302
            .....|..:|||.|:         ..|:..::|:.:......:...:.     ::...||     
 Worm   268 GNGDRYVIDLPEEYY---------NPGINQMINSGVIIKLAERGQGID-----NDLTFLP----- 313

  Fly   303 GFVVTAGREARIPI----------EPVYEDALPTIRSIKKSVRRCLFSDENDLAYYRTYSRKNCE 357
                 ||..|.:|:          .|.||               |    |.|  .:..|||.:|.
 Worm   314 -----AGVHAIMPLLGTQFEFMNDPPRYE---------------C----EED--PHGNYSRVHCF 352

  Fly   358 LECEAKLLLRECSCVLYYLPRIDPLARVCGPN----DNQCTDRVQ------TEIESSLTNLS--- 409
            .:|......:.|.|        .|.|   ..|    |..|| ..|      |::....:|||   
 Worm   353 EDCLTLDAQQTCQC--------SPAA---AQNPAYPDKLCT-ATQLYHCFFTKLFPEDSNLSKAI 405

  Fly   410 ---C-ENCWPGCFELTYRATLSTASIVSD------PRFQAGENLPEYIFHGPYSNASEISILHFY 464
               | :.|...|....|...:|.:||.|:      ||.:..:...:.|....||......|.|..
 Worm   406 VDACKKECKAPCHAWNYNKQVSYSSIPSEASKKLLPREEWEKMKRKIILDIYYSELDYTIIKHVI 470

  Fly   465 YMTNIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIFFY---ITVRPYCASRTLRQR-- 524
            .|.             .:..::..||...||.|.|:.|:.:|..|   ..:..:|..::.|:|  
 Worm   471 AMP-------------LSSLIAQIGGQFSLFAGGSLISLCQIVIYSVRYVMHKFCGLKSQRRRCR 522

  Fly   525 -----HKRRLEQLSWLTPIRMPVRRALRRNRGGLLRNPPPP 560
                 |:.|.         |..:||. |||.....|:.|.|
 Worm   523 ETREAHEARQ---------RRDMRRR-RRNSTSHSRSTPKP 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk28NP_573169.2 ASC 43..509 CDD:279230 104/522 (20%)
del-9NP_508622.2 ASC 85..502 CDD:307141 103/519 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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