DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk28 and del-8

DIOPT Version :9

Sequence 1:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_509617.2 Gene:del-8 / 182514 WormBaseID:WBGene00007518 Length:553 Species:Caenorhabditis elegans


Alignment Length:586 Identity:115/586 - (19%)
Similarity:200/586 - (34%) Gaps:177/586 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LHGLKYIAEESITIPERIFFGLAFVLVVILSVFFISNVYVKWSASPIIISTSAKQKLTSNMPFPA 113
            :|||.. |..|.|:..|||:.:..::.:.|..|....:.:::...|...||:.  :|..::.|||
 Worm    38 VHGLSQ-ALMSKTLRMRIFWWIVIIICISLGAFTTVLIIIEYIQGPTATSTTI--RLVDSLEFPA 99

  Fly   114 ITIC--------------NLNQALLSKVDRIGRTSTNFSLLMGLCDQGGDTTI----------SY 154
            ||||              ::.::|....|:.......|.:.....:...|.|.          :|
 Worm   100 ITICPKVPDSFNITGLRGDIKESLPDISDKTADDLLEFFVAGSGLENMNDVTYFNRTYLSHLNNY 164

  Fly   155 IGTWK-------YFKAILVDVAQPCEKMLLYCSFGSREEDC--SWLFTSILTDDGLCC----NFN 206
            ...|.       :|:.|.......||.:...|....:..||  ..:...::...|:|.    |.|
 Worm   165 YKIWSEGYSVDGFFEIIQQKYGYKCEDLFYECQLAGKILDCCNDLMVRRVVMRRGICYQTRKNVN 229

  Fly   207 ALHPSYLIRNYSDDV-------RLETAHPN-----TRYELIDW-TPEKGYARNLPEFY-FPRTSG 257
                    ::.:||:       :..|::.:     |:.:||.: |.........|.|| :|....
 Worm   230 --------QSEADDIGRIVFSLKAPTSYTSVKTNYTQTQLIVYITDNHDVVTEFPRFYLYPNEWN 286

  Fly   258 GTGIRMGLTVVLNASIAEYYCTKSMSVGFKVLVHNPAELPKVSNYGFVVTAGREARIPIEPVYED 322
                ||..|    |.:.|....|.:                .:|:.|    ||:|          
 Worm   287 ----RMRFT----ARLIELIQNKGV----------------CTNHIF----GRDA---------- 313

  Fly   323 ALPTIRSIKKSVRRCLFSDENDLAYYRTYSRKNCELECEAKLLLRECSCVLYYL---PRIDPLAR 384
                         .||         .|.:...|         ::...:|.|.||   .::.|...
 Worm   314 -------------ECL---------VRKWYLSN---------IIIPFNCTLPYLKSITKLPPTTG 347

  Fly   385 VCGPN---DNQCTDRVQTEIESSLTNLSCENCWPGCFELTYRATLSTASIVSDPRFQAGENLPEY 446
            ||.|:   ||. .|::|....|:..|   |.|.|||....|:.::..:..:|.        ..:|
 Worm   348 VCKPDVIADNY-LDKIQYVWNSAEVN---EECTPGCNRWDYQTSVQQSQTLSP--------FEDY 400

  Fly   447 IFHGPYSNASEISILHFYYMTNIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIFFYIT 511
            .|    :..:..:.|.:.|:..|:.::...       |:|..||..|.|:|.||.::|::..|..
 Worm   401 TF----NLEASFNDLQYEYVKEIYTTSIPG-------FMSQIGGQFGFFLGLSIITLIQMVLYGF 454

  Fly   512 VRPYCASRTLRQR------------HKRRLEQLSWLTPIRMPVRRALRRNRGGLLR-----NPPP 559
            ...:..::...||            :.|........|.|..|.:...:.:...|.|     |||.
 Worm   455 HSAFMFAKKHIQRKFPFCKIHPSDDYPRSTMTFDNSTNIYPPEKNISKEHIATLSRRVIATNPPS 519

  Fly   560 P 560
            |
 Worm   520 P 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk28NP_573169.2 ASC 43..509 CDD:279230 102/516 (20%)
del-8NP_509617.2 ASC 38..452 CDD:279230 102/516 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162334
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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