DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk28 and unc-105

DIOPT Version :9

Sequence 1:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster
Sequence 2:NP_001364812.1 Gene:unc-105 / 174306 WormBaseID:WBGene00006832 Length:974 Species:Caenorhabditis elegans


Alignment Length:733 Identity:147/733 - (20%)
Similarity:236/733 - (32%) Gaps:290/733 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 KNSTLHGLKYIAEESITIPERIFFGLAF---VLVVILSVFFISNVYVKWSASPIIISTSAKQKLT 106
            |.||.||:.:.|  :.....|.|:..||   :|.:::.:||:.:.|.::..:   :....|   .
 Worm   122 KQSTFHGISHAA--TADGKWRWFWYTAFTICLLALLIQIFFLISKYRQYGKT---VDLDLK---F 178

  Fly   107 SNMPFPAITICNLNQALLSKVD--------------RIGRTSTNFSLLMGLCDQGG--------- 148
            .|.|||:|||||||....|.:.              |||.......:...|...||         
 Worm   179 ENAPFPSITICNLNPYKKSAIQSNPNTKAMMEAYSRRIGSGDKTEGIAAALSATGGLHAKVRRAK 243

  Fly   149 ----------DTTISYIGTWKYFKAI---LVDVAQ------------------------------ 170
                      |.        :|.:|.   |.|:.|                              
 Worm   244 RKAKGKPRLRDR--------RYHQAFAQCLCDIEQLTGDRKGSCFAAFKGKIEIDTNNTAGFMNL 300

  Fly   171 -----------------PCEKMLLYCSFGSREEDCS-----------------WLFTSILTDDGL 201
                             ||   ..|.|:  :|:.||                 .|:.:|.....|
 Worm   301 HTSRCLCQLDTVSKALWPC---FPYSSW--KEKLCSECVDNTGHCPMRFYKGNELYENIKEQVDL 360

  Fly   202 C-CNFNALH-----------------------------------------------PSYL----I 214
            | |:....|                                               |:..    .
 Worm   361 CLCHKEYNHCVSTRDDGIILEISPNDELNDLDIGKKIASQLSAQQEKQAEVTTTEAPTVTQALGF 425

  Fly   215 RNYSDDVRL----------------ETAHPNTRYELIDWTPEKGYAR------------------ 245
            ...:||:.:                |.|..:..|||.:...:..:.:                  
 Worm   426 EELTDDIAITSQAQENLMFAVGEMSEKAKESMSYELDELVLKCSFNQKDCQMDRDFTLHYDNTFG 490

  Fly   246 NLPEFYFPRT----SGGTGIRMGLTVVLNASIAEYYCTKSMSVGFKVLVHNPAELPKVSNYGFVV 306
            |...|.:.||    |...|...||.|:|.|:::||..| :.:|||::.||:...:|....:|:..
 Worm   491 NCYTFNYNRTAEVASHRAGANYGLRVLLYANVSEYLPT-TEAVGFRITVHDKHIVPFPDAFGYSA 554

  Fly   307 TAG--------REARIPIEPVYEDALPTIRSIKKSVRRCLFSDENDLAYYRT---YSRKNCELEC 360
            ..|        .:..|.:||.|              ..|....|:...:..|   ||.:.|...|
 Worm   555 PTGFMSSFGVRMKQFIRLEPPY--------------GHCRHGGEDAATFVYTGFQYSVEACHRSC 605

  Fly   361 EAKLLLRECSCV--LYYLPRIDPLARVCGPNDNQCTDRVQTEIESSLTNLS-------------- 409
            ..|:::..|.|.  :|      |:|.:.|.|...| ..|..:....|.|.:              
 Worm   606 AQKVIVEACGCADPMY------PVAEMFGNNTKPC-QAVNMDQRECLRNTTLWLGELYSKGKEAI 663

  Fly   410 ---CENCWPGCFELTYRATLSTASIVSDPRFQAG-----ENLP-EYIFHGPY-SNASEISILHFY 464
               | .|...|.|..|..|.|:|      |:.:|     |.|| :::....| .||:.:.|  ||
 Worm   664 IPDC-YCHQPCQETNYEVTYSSA------RWPSGSAKVMECLPGDFLCLEKYRKNAAMVQI--FY 719

  Fly   465 YMTNIFRSTTKSEMFGFTEFLSNTGGLLGLFMGFSIFSVIEIFFYITVRPYCASRTLRQRHKRRL 529
            ...| :.:..:|..:..|..|::.|||.||::|.|:.|::||   :|:..:.....:|    :|.
 Worm   720 EELN-YETMQESPAYTLTSVLADLGGLTGLWIGASVVSLLEI---VTLIVFATQAYVR----KRK 776

  Fly   530 EQLSWLTPIRMPVRRALR 547
            ..:|..:...:||.||.|
 Worm   777 GSISAQSHHSVPVHRASR 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk28NP_573169.2 ASC 43..509 CDD:279230 138/693 (20%)
unc-105NP_001364812.1 deg-1 119..763 CDD:273309 138/696 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 106 1.000 Domainoid score I4100
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 101 1.000 Inparanoid score I3564
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.900

Return to query results.
Submit another query.