DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk28 and asic4

DIOPT Version :9

Sequence 1:NP_573169.2 Gene:ppk28 / 32671 FlyBaseID:FBgn0030795 Length:606 Species:Drosophila melanogaster
Sequence 2:XP_031749131.1 Gene:asic4 / 100486325 XenbaseID:XB-GENE-940165 Length:535 Species:Xenopus tropicalis


Alignment Length:553 Identity:124/553 - (22%)
Similarity:212/553 - (38%) Gaps:138/553 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GCKKDSESDDDENTICSRA-AIKRSVVYYLKNSTLHGLKYIAEESITIPERIFFGLAFVLVVILS 79
            |.:|:.|..:.|:.|.... |..|.:..:...||||||::|.:......::..:.|||:..::..
 Frog    16 GNQKEKEEGERESLIGDEVPAAGRDLAAFASTSTLHGLRHIFQTGRLGIKQSLWALAFLASLLFF 80

  Fly    80 VFFISNVYVKWSASPIIISTSAKQKLTSNMPFPAITICNLNQ----AL-------------LSKV 127
            ::.::...:.:...|.:  |:..:::...|.||||||||:|:    ||             |...
 Frog    81 LYQVAKCALYYLEHPHV--TAVDEEVMGEMIFPAITICNINRFRHSALTDPDIYHLANLTGLPPK 143

  Fly   128 DRIGRTSTNFSLLMGLCDQGGDTTISYIGTWKYFKAILVDV----AQPCEKMLLYCSFGSREEDC 188
            ||.|...::   ||                  |....::|:    .....:||..|:|..  :.|
 Frog   144 DREGHRDSD---LM------------------YDDPDMLDIVNRTGHQLAEMLKSCNFSG--DSC 185

  Fly   189 S-WLFTSILTDDGLCCNFNALHPSYLIRNYSDDVRLETAHPNTRYELIDWTPEKGYARNLPEFYF 252
            | ..|:.:.|..|.|..|||                :..||....:                   
 Frog   186 SAQNFSVVFTRYGKCYTFNA----------------DKKHPKVSRQ------------------- 215

  Fly   253 PRTSGGTGIRMGLTVVLNASIAEYY------CTKSMSVGFKVLVHNPAELPKVSNYGFVVTAGRE 311
                ||.|  .||.::|:....||.      ...|...|.:|.:|:..|.|.:...||.|:.|.:
 Frog   216 ----GGMG--NGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQDEPPYIHQMGFGVSPGFQ 274

  Fly   312 ARIPIEPVYEDALPTIRSIKKSVRRCLFS--DENDLAYYRTYSRKNCELECEAKLLLRECSCVLY 374
            ..:..:......||      :....|..|  .|..|:.|.|||...|.|:||.:.::|:|:|.:.
 Frog   275 TFVSCQEQRMTYLP------QPWGNCRSSIPGEEFLSGYSTYSISACRLQCEKEAVIRKCACRMV 333

  Fly   375 YLPRIDPLARVCGPNDNQCTDRV-QTEIESSLTNLSCENCWPGCFELT-YRATLSTASIVS--DP 435
            ::|..:   .:|.|....|.|.: ...:|.:....||    |....|| |...:|...|.:  ..
 Frog   334 HMPGNE---TICSPVMYMCADHILDNMVEDTSEKCSC----PTPCNLTRYSKEISMVRIPNKGSA 391

  Fly   436 RFQAGENLPEYIFHGPYSNASEISILHFYYMTNIF------RSTTKSEMFGFTEFLSNTGGLLGL 494
            |:.|.:           .|.:|..|...:.:.:||      .:..:.:.:.....|.:.||.:||
 Frog   392 RYLARK-----------YNKNETYIRENFLVLDIFFEALNYETIEQKKAYDLPSLLGDIGGQMGL 445

  Fly   495 FMGFSIFSVIEIFFYITVRPYCASRTLRQRHKR 527
            |:|.|..:::||..|:       ...:|.:.||
 Frog   446 FIGASFLTILEILDYM-------YEVIRDKVKR 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk28NP_573169.2 ASC 43..509 CDD:279230 113/505 (22%)
asic4XP_031749131.1 ASC 39..514 CDD:413546 118/530 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 117 1.000 Domainoid score I5830
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 117 1.000 Inparanoid score I4647
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48391
Panther 1 1.100 - - O PTHR11690
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.160

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