DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13005 and Zfp839

DIOPT Version :9

Sequence 1:NP_573168.1 Gene:CG13005 / 32670 FlyBaseID:FBgn0030794 Length:480 Species:Drosophila melanogaster
Sequence 2:XP_006240675.1 Gene:Zfp839 / 500723 RGDID:1562557 Length:922 Species:Rattus norvegicus


Alignment Length:642 Identity:125/642 - (19%)
Similarity:192/642 - (29%) Gaps:233/642 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PSVLAEL-QVLPDKTGGVQDRQEAAKNPAENSVPDEDLPAAGGDLLRVKDTLGQLACSLHKLSKN 71
            ||||::. :.|||          .|:..|:...|..:.|.    ||    |..:|.....|:|.:
  Rat    50 PSVLSDAGRRLPD----------GARQTAQQRGPGAEAPR----LL----TPQELEAICVKVSGD 96

  Fly    72 DHIVIDRKRHQVIRTDAATQQLTIYRCPDP---AVMGIRPAIEKNAQNPP----AKVGRPSK--R 127
            ..|     :.:.:...|..|..|:.:...|   :.||:      :|.:|.    ..:||...  |
  Rat    97 TKI-----KERAMPPLATIQPKTVRQSQLPGGSSSMGV------SASSPQLLRVQALGRTESQPR 150

  Fly   128 ACSVATAPVAKKPTLAEQKPAPDTHRTRSGRQVRSLMPQPAPVTSG----SAVEPSSARML---- 184
            .|..:..|.|.:..:.........|||..||.: :|.|..|   ||    :||...|||:|    
  Rat   151 TCRGSLQPPAPQALVQRVSKRVKAHRTAHGRGI-TLSPVAA---SGPHTLAAVSSGSARLLISSL 211

  Fly   185 -----EMLVADLRDKDYRAPMAAP---------------------------KSTSVSSSVSISQE 217
                 |.....||.:.....::.|                           ...||.....:.::
  Rat   212 HTAHTEKSKKSLRVRTRSGRVSRPPRYKARDYKFIKTEDLAEGHLSDSDDYSELSVEEEEELREK 276

  Fly   218 PTTTTTIQRAV-PKNAVCPGCGKIFLGR-RLQRHFVKFPEH------------------------ 256
            |........|: ||...|..|.|.::|: .|.||....|:|                        
  Rat   277 PAFLDLEVCALRPKAFKCQVCEKSYIGKGGLARHCKLNPDHCQLQPEALLCGKANGSPTLGCSDS 341

  Fly   257 ----------------------------------------MPRPGEQTPPV-------------- 267
                                                    :|.|..::|..              
  Rat   342 KTRGLACLKPSIPATHCMEEAGSAWPTLQNGEPVEVEETLVPEPQNRSPSALLRPEKYLKPKSGN 406

  Fly   268 -------AVATVPST--VHPPSTPS------------------------LFGLLTAQLQRHSHLS 299
                   :.|::..:  |.|.|.|:                        |.||:..||.:...|.
  Rat   407 WESQAEFSTASLQESRAVQPNSHPAGPSGLSVSRGAELREALRQCGREELLGLVLPQLAQAVTLY 471

  Fly   300 E--------EQRSDLFLNELNDFVEQLQLRSQRLIR---NTSG------LHFVNARIARVLGIPE 347
            |        ..|:..|...:....|||....:|:.:   ::||      |...|..:||.|||.|
  Rat   472 ELLLVKVEKSPRTKPFFPAVYKEFEQLYDVVKRMCQDYLSSSGACSQEPLEINNDEVARSLGITE 536

  Fly   348 GQYALDMSAMESPLAPMPESEGAALVAGSGSEGARNLVVYAELSMSLDDPLTDEAAQRLNLSAGG 412
                 .:...|:|.....|:|| .|..|||.:..|.|...|          |.|....:......
  Rat   537 -----FLRKKETPKCSSQETEG-KLEEGSGRKRERELGALA----------TGEGLATVKKPRTV 585

  Fly   413 QLHPPSEESLLRNVSDLMQPPVATAPPTVNHGYDHASDNAVEALTMKETPNTEAILD 469
            .| |......|.:.|...|...::..|.::.|.:.|   |.|.....|....|.:.|
  Rat   586 AL-PTDVPEYLPSTSGCQQKSKSSRAPAISKGSEPA---ATECSLCSEGSCREMVPD 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13005NP_573168.1 None
Zfp839XP_006240675.1 DUF4764 110..895 CDD:292583 106/559 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_29BK8
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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