DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4789 and rab10

DIOPT Version :10

Sequence 1:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_001002566.1 Gene:rab10 / 436839 ZFINID:ZDB-GENE-040718-304 Length:201 Species:Danio rerio


Alignment Length:175 Identity:41/175 - (23%)
Similarity:69/175 - (39%) Gaps:54/175 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RIVVVGDSGVGKTSLTHLIT---HNEALIRPGWTVGCNIQVKMHPFREGTARECPYFVELFDVGG 69
            :::::||||||||.:....:   .|...|.   |:|.:.::|....:....:     ::::|..|
Zfish    11 KLLLIGDSGVGKTCVLFRFSDDAFNTTFIS---TIGIDFKIKTVELQGKKIK-----LQIWDTAG 67

  Fly    70 SLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEIVNKEGKDTNKSNGASMPPSPPSPLS 134
            ........:.:|.|..||:||:|:|||||...:..||..|                         
Zfish    68 QERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNI------------------------- 107

  Fly   135 SFSTDNLGTDGHILFDMEEFLGATQTPILVMGTKLDLLDEKRHPK 179
                     |.|...|:|..|         :|.|.|:.|::..||
Zfish   108 ---------DEHANEDVERML---------LGNKCDMEDKRVVPK 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4789NP_573166.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..228 CDD:476819 41/175 (23%)
rab10NP_001002566.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 41/175 (23%)

Return to query results.
Submit another query.