Protein Alignment CG4789 and Rab6

DIOPT Version :9

• Sequence 1: NP_573166.1
• Gene: CG4789 / 32668
• FlyBaseID: FBgn0030792
• Length: 274
• Species: Drosophila melanogaster
• Sequence 2: NP_001285869.1
• Gene: Rab6 / 34636
• FlyBaseID: FBgn0015797
• Length: 208
• Species: Drosophila melanogaster
• Alignment Length: 171
• Identity: 31/171 - (18%)
• Similarity: 61/171 - (35%)
• Gaps: 48/171 - (28%)

  Fly     6 RVRIVVVGDSGVGKTSLTHLITHNEALIRPGWTVGCNIQVKMHPFREGTARECPYFVELFDVGGS 70
            :.::|.:|:..||||||.....::........|:|.:...|.....:.|.|     ::|:|..|.
  Fly    12 KFKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR-----LQLWDTAGQ 71

  Fly    71 LNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEIVNKEGKDTNKSNGASMPPSPPSPLSS 135
            ...::....:.......::|:|:||..|..|...|:.::..:.|.|
  Fly    72 ERFRSLIPSYIRDSTVAVVVYDITNTNSFHQTSKWIDDVRTERGSD------------------- 117

  Fly   136 FSTDNLGTDGHILFDMEEFLGATQTPILVMGTKLDLLDEKR 176
                                    ..|:::|.|.||.|:::
  Fly   118 ------------------------VIIMLVGNKTDLSDKRQ 134

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4789	NP_573166.1	P-loop_NTPase	7..228	CDD:304359	31/170 (18%)
Rab6	NP_001285869.1	Rab6	13..173	CDD:206654	31/170 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454187
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24073
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.030