DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4789 and Rab10

DIOPT Version :10

Sequence 1:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_523419.1 Gene:Rab10 / 33025 FlyBaseID:FBgn0015789 Length:204 Species:Drosophila melanogaster


Alignment Length:168 Identity:36/168 - (21%)
Similarity:68/168 - (40%) Gaps:48/168 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 RIVVVGDSGVGKTSLTHLITHNEALIRPGWTVGCNIQVKMHPFREGTARECPYFVELFDVGGSLN 72
            :::::||||||||.:....:.:........|:|.:.::|....|....:     ::::|..|...
  Fly    11 KLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIK-----LQIWDTAGQER 70

  Fly    73 HKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEIVNKEGKDTNKSNGASMPPSPPSPLSSFS 137
            .....:.:|.|..||:||:|:||.||...::.||..|                            
  Fly    71 FHTITTSYYRGAMGIMLVYDITNEKSFENIVKWLRNI---------------------------- 107

  Fly   138 TDNLGTDGHILFDMEEFLGATQTPILVMGTKLDLLDEK 175
                  |.|...|:|:         :::|.|.|:.|::
  Fly   108 ------DEHANEDVEK---------MILGNKCDMTDKR 130

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4789NP_573166.1 P-loop containing Nucleoside Triphosphate Hydrolases 7..228 CDD:476819 36/168 (21%)
Rab10NP_523419.1 Rab8_Rab10_Rab13_like 7..173 CDD:206659 36/168 (21%)

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