DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4789 and Rab9D

DIOPT Version :9

Sequence 1:NP_573166.1 Gene:CG4789 / 32668 FlyBaseID:FBgn0030792 Length:274 Species:Drosophila melanogaster
Sequence 2:NP_727432.1 Gene:Rab9D / 318149 FlyBaseID:FBgn0067052 Length:197 Species:Drosophila melanogaster


Alignment Length:115 Identity:32/115 - (27%)
Similarity:54/115 - (46%) Gaps:21/115 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NNRVRIVVVGDSGVGKTSLTHLITHNEALIRPGWTVGCNIQVKMHPFREGTARECPY-------- 60
            :|..:|:::||||||||.|....:.|:...|...|||.:            .|||..        
  Fly     5 DNPFKIILLGDSGVGKTCLLMRFSDNQFTTRHRSTVGLD------------RRECSVEFADWRMG 57

  Fly    61 -FVELFDVGGSLNHKNTRSVFYAGIDGIILVHDLTNAKSQRQLIDWLYEI 109
             .::::|.......|..::.......||:||:|:|::||.:.:..|:.||
  Fly    58 RMLQVWDTSDDERFKLLKATQCRSAHGILLVYDITSSKSFQNIDGWMKEI 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4789NP_573166.1 P-loop_NTPase 7..228 CDD:304359 31/112 (28%)
Rab9DNP_727432.1 RAB 8..171 CDD:197555 31/112 (28%)
Rab 8..167 CDD:206640 31/112 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454359
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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