DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sap30 and sap30l

DIOPT Version :9

Sequence 1:NP_001285352.1 Gene:Sap30 / 32664 FlyBaseID:FBgn0030788 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_001017141.1 Gene:sap30l / 549895 XenbaseID:XB-GENE-960202 Length:181 Species:Xenopus tropicalis


Alignment Length:174 Identity:97/174 - (55%)
Similarity:128/174 - (73%) Gaps:12/174 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGFSTGEEDSRG--------HTDQTCCLIDDMERCRNQAGYASYSKRIQKTVAQKRLKLSSDPAA 59
            ||||| |||||.        ...|||||||..|||...||.||:|||:||:::||:|||..|.:.
 Frog     2 NGFST-EEDSRDGPPAQAAPFFGQTCCLIDGGERCPRPAGNASFSKRVQKSISQKKLKLDIDKSV 65

  Fly    60 QHIYICDHHKERIQSVRTKRRRKDSED--DSNETDTDLHEFPDLYQLGVSTLRRYKRHFKVQTRQ 122
            :|:||||.||..|||||.||:||.|:|  ||.|.:||:.|. ||:||.|:|||||||::|:|||.
 Frog    66 RHLYICDFHKNYIQSVRNKRKRKTSDDGGDSPEHETDVPEV-DLFQLQVNTLRRYKRYYKLQTRP 129

  Fly   123 GMKRAQLADTIMKHFKTIPIKEKEIITFFVYMVKMGSNKLDQKN 166
            |:.:||||:|:.:||:.||:.|||.:.:|:||||...::||||:
 Frog   130 GLNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNRSRLDQKS 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap30NP_001285352.1 zf-SAP30 16..86 CDD:404707 42/69 (61%)
SAP30_Sin3_bdg 104..156 CDD:404708 29/51 (57%)
sap30lNP_001017141.1 zf-SAP30 21..92 CDD:372766 42/70 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 82..103 11/20 (55%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:Q9HAJ7 83..88 2/4 (50%)
Important for DNA and phosphoinositide binding. /evidence=ECO:0000250|UniProtKB:Q9HAJ7 85..87 1/1 (100%)
SAP30_Sin3_bdg 111..163 CDD:372767 29/51 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 96 1.000 Domainoid score I7209
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11632
Inparanoid 1 1.050 189 1.000 Inparanoid score I3774
OMA 1 1.010 - - QHG48250
OrthoDB 1 1.010 - - D1520155at2759
OrthoFinder 1 1.000 - - FOG0004254
OrthoInspector 1 1.000 - - otm49322
Panther 1 1.100 - - LDO PTHR13286
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4744
SonicParanoid 1 1.000 - - X2991
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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