DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sap30 and sap30l

DIOPT Version :9

Sequence 1:NP_001285352.1 Gene:Sap30 / 32664 FlyBaseID:FBgn0030788 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_999868.1 Gene:sap30l / 327079 ZFINID:ZDB-GENE-030131-5287 Length:178 Species:Danio rerio


Alignment Length:172 Identity:94/172 - (54%)
Similarity:126/172 - (73%) Gaps:10/172 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGFSTGEEDSRG------HTDQTCCLIDDMERCRNQAGYASYSKRIQKTVAQKRLKLSSDPAAQH 61
            ||||| ||||..      ...|:||||:|.|||...||.||:||||||:::|::|||..|.:.:|
Zfish     2 NGFST-EEDSHDGPPAPPFFGQSCCLIEDAERCGRPAGNASFSKRIQKSISQRKLKLDIDKSVRH 65

  Fly    62 IYICDHHKERIQSVRTKRRRKDSEDDSNETDTDLHEFP--DLYQLGVSTLRRYKRHFKVQTRQGM 124
            :||||.||..|||||.||:||.|:|.....|.:: |.|  ||:||.|:||||||||:|:|||.|:
Zfish    66 LYICDFHKNFIQSVRNKRKRKTSDDGGESPDHEV-EVPEVDLFQLQVNTLRRYKRHYKIQTRPGL 129

  Fly   125 KRAQLADTIMKHFKTIPIKEKEIITFFVYMVKMGSNKLDQKN 166
            .:||||:|:.:||:.||:.|||.:|:|:||||...::||||:
Zfish   130 NKAQLAETVSRHFRNIPVNEKETLTYFIYMVKSSKSRLDQKS 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap30NP_001285352.1 zf-SAP30 16..86 CDD:404707 41/69 (59%)
SAP30_Sin3_bdg 104..156 CDD:404708 31/51 (61%)
sap30lNP_999868.1 zf-SAP30 20..90 CDD:290577 41/69 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..99 8/18 (44%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:Q9HAJ7 81..86 2/4 (50%)
Important for DNA and phosphoinositide binding. /evidence=ECO:0000250|UniProtKB:Q9HAJ7 83..85 1/1 (100%)
SAP30_Sin3_bdg 110..158 CDD:290578 28/47 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576352
Domainoid 1 1.000 95 1.000 Domainoid score I7358
eggNOG 1 0.900 - - E1_28PSY
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11632
Inparanoid 1 1.050 189 1.000 Inparanoid score I3883
OMA 1 1.010 - - QHG48250
OrthoDB 1 1.010 - - D1520155at2759
OrthoFinder 1 1.000 - - FOG0004254
OrthoInspector 1 1.000 - - otm25695
orthoMCL 1 0.900 - - OOG6_106692
Panther 1 1.100 - - LDO PTHR13286
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4744
SonicParanoid 1 1.000 - - X2991
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.