DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sap30 and sap30l

DIOPT Version :10

Sequence 1:NP_573162.1 Gene:Sap30 / 32664 FlyBaseID:FBgn0030788 Length:173 Species:Drosophila melanogaster
Sequence 2:NP_999868.1 Gene:sap30l / 327079 ZFINID:ZDB-GENE-030131-5287 Length:178 Species:Danio rerio


Alignment Length:172 Identity:94/172 - (54%)
Similarity:126/172 - (73%) Gaps:10/172 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NGFSTGEEDSRG------HTDQTCCLIDDMERCRNQAGYASYSKRIQKTVAQKRLKLSSDPAAQH 61
            ||||| ||||..      ...|:||||:|.|||...||.||:||||||:::|::|||..|.:.:|
Zfish     2 NGFST-EEDSHDGPPAPPFFGQSCCLIEDAERCGRPAGNASFSKRIQKSISQRKLKLDIDKSVRH 65

  Fly    62 IYICDHHKERIQSVRTKRRRKDSEDDSNETDTDLHEFP--DLYQLGVSTLRRYKRHFKVQTRQGM 124
            :||||.||..|||||.||:||.|:|.....|.:: |.|  ||:||.|:||||||||:|:|||.|:
Zfish    66 LYICDFHKNFIQSVRNKRKRKTSDDGGESPDHEV-EVPEVDLFQLQVNTLRRYKRHYKIQTRPGL 129

  Fly   125 KRAQLADTIMKHFKTIPIKEKEIITFFVYMVKMGSNKLDQKN 166
            .:||||:|:.:||:.||:.|||.:|:|:||||...::||||:
Zfish   130 NKAQLAETVSRHFRNIPVNEKETLTYFIYMVKSSKSRLDQKS 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sap30NP_573162.1 zf-SAP30 16..86 CDD:404707 41/69 (59%)
SAP30_Sin3_bdg 104..156 CDD:464006 31/51 (61%)
sap30lNP_999868.1 zf-SAP30 19..90 CDD:404707 41/70 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 80..99 8/18 (44%)
Nuclear localization signal (NLS). /evidence=ECO:0000250|UniProtKB:Q9HAJ7 81..86 2/4 (50%)
Important for DNA and phosphoinositide binding. /evidence=ECO:0000250|UniProtKB:Q9HAJ7 83..85 1/1 (100%)
SAP30_Sin3_bdg 109..161 CDD:464006 31/51 (61%)

Return to query results.
Submit another query.