DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9609 and CG3281

DIOPT Version :9

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:305 Identity:73/305 - (23%)
Similarity:118/305 - (38%) Gaps:82/305 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EEFKQRQ-GRRNSIGSAK-------YACSMPKCEATFKRLDQLDRH------------------E 56
            :|.:.|: .|.:.:||..       |.|::  |...|.:.:.|.||                  |
  Fly   178 DEIENRELSRPSQLGSRLNHSANFIYKCAV--CPRVFAKSESLTRHFSQAHKLTADVAAMKLANE 240

  Fly    57 YHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTH---------ERPESAAKKTVKCALEECSKMF 112
            ...||:    .:.|.|.:|:.....|:||:::.|         |..:::|:|.: ....:|....
  Fly   241 SCGTGL----LTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRI-AKRRDCPHCG 300

  Fly   113 IS--VSNMTRHMRETHESPKVYPCSQCSAKFSQKLKLKRHEIREHTLEYPYSCSKCSRGFYQQWQ 175
            :|  ||::|.|:|. |.....|.|.||...|.:...|..| :|:||.|.|..|..||:.|..|  
  Fly   301 LSFPVSSLTIHIRR-HTGDNPYKCDQCEKAFPRSQDLSLH-MRQHTGERPSECKICSKKFISQ-- 361

  Fly   176 CQSHEPSCKLYECPGCPLQFDKWTLYTKHCRDSLH-GKNRHKCDRCDSAFDKPSELKRHLEVKH- 238
                                   ....:|.|  || |:..:.|..|..:|.:.::||.|:. :| 
  Fly   362 -----------------------NKLARHMR--LHTGQRPYSCKMCSKSFVQSNDLKIHMR-RHT 400

  Fly   239 -KEAAQTDECATSFTCNEEGCGKSYSYLRNLRQHMLTAHSGRRFE 282
             :...|...|..||.     ||...:..||.:.|::....|...|
  Fly   401 GERPYQCGVCGESFV-----CGSHLNIHRNRKGHLIAVIPGNEVE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 C2H2 Zn finger 40..59 CDD:275368 6/36 (17%)
zf-C2H2_8 67..150 CDD:292531 24/93 (26%)
C2H2 Zn finger 67..90 CDD:275368 6/22 (27%)
C2H2 Zn finger 106..126 CDD:275368 7/21 (33%)
C2H2 Zn finger 134..155 CDD:275368 7/20 (35%)
C2H2 Zn finger 188..210 CDD:275368 2/21 (10%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..276 CDD:275368 5/22 (23%)
C2H2 Zn finger 283..302 CDD:275368 73/305 (24%)
CG3281NP_650132.1 zf-AD 14..92 CDD:285071
C2H2 Zn finger 205..226 CDD:275368 6/22 (27%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 33/125 (26%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
zf-H2C2_2 307..330 CDD:290200 8/23 (35%)
C2H2 Zn finger 323..343 CDD:275368 7/20 (35%)
zf-H2C2_2 335..358 CDD:290200 10/23 (43%)
C2H2 Zn finger 351..371 CDD:275368 7/46 (15%)
zf-H2C2_2 364..388 CDD:290200 8/25 (32%)
C2H2 Zn finger 379..399 CDD:275368 6/20 (30%)
zf-H2C2_2 391..416 CDD:290200 8/30 (27%)
C2H2 Zn finger 407..424 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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