DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9609 and CG3281

DIOPT Version :10

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_650132.1 Gene:CG3281 / 41445 FlyBaseID:FBgn0260741 Length:538 Species:Drosophila melanogaster


Alignment Length:305 Identity:73/305 - (23%)
Similarity:118/305 - (38%) Gaps:82/305 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EEFKQRQ-GRRNSIGSAK-------YACSMPKCEATFKRLDQLDRH------------------E 56
            :|.:.|: .|.:.:||..       |.|::  |...|.:.:.|.||                  |
  Fly   178 DEIENRELSRPSQLGSRLNHSANFIYKCAV--CPRVFAKSESLTRHFSQAHKLTADVAAMKLANE 240

  Fly    57 YHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTH---------ERPESAAKKTVKCALEECSKMF 112
            ...||:    .:.|.|.:|:.....|:||:::.|         |..:::|:|.: ....:|....
  Fly   241 SCGTGL----LTCEHCPRTFKRQDTLRRHMQAFHPDAIALEPEETTDNSARKRI-AKRRDCPHCG 300

  Fly   113 IS--VSNMTRHMRETHESPKVYPCSQCSAKFSQKLKLKRHEIREHTLEYPYSCSKCSRGFYQQWQ 175
            :|  ||::|.|:|. |.....|.|.||...|.:...|..| :|:||.|.|..|..||:.|..|  
  Fly   301 LSFPVSSLTIHIRR-HTGDNPYKCDQCEKAFPRSQDLSLH-MRQHTGERPSECKICSKKFISQ-- 361

  Fly   176 CQSHEPSCKLYECPGCPLQFDKWTLYTKHCRDSLH-GKNRHKCDRCDSAFDKPSELKRHLEVKH- 238
                                   ....:|.|  || |:..:.|..|..:|.:.::||.|:. :| 
  Fly   362 -----------------------NKLARHMR--LHTGQRPYSCKMCSKSFVQSNDLKIHMR-RHT 400

  Fly   239 -KEAAQTDECATSFTCNEEGCGKSYSYLRNLRQHMLTAHSGRRFE 282
             :...|...|..||.     ||...:..||.:.|::....|...|
  Fly   401 GERPYQCGVCGESFV-----CGSHLNIHRNRKGHLIAVIPGNEVE 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 COG5048 38..309 CDD:227381 66/277 (24%)
C2H2 Zn finger 40..59 CDD:275368 6/36 (17%)
zf-C2H2_8 67..150 CDD:464935 24/93 (26%)
C2H2 Zn finger 67..90 CDD:275368 6/22 (27%)
C2H2 Zn finger 106..126 CDD:275368 7/21 (33%)
C2H2 Zn finger 134..155 CDD:275368 7/20 (35%)
C2H2 Zn finger 188..210 CDD:275368 2/21 (10%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..276 CDD:275368 5/22 (23%)
C2H2 Zn finger 283..302 CDD:275368 73/305 (24%)
CG3281NP_650132.1 zf-AD 15..91 CDD:214871
C2H2 Zn finger 205..226 CDD:275368 6/22 (27%)
C2H2 Zn finger 249..266 CDD:275368 5/16 (31%)
COG5048 <294..>391 CDD:227381 33/125 (26%)
C2H2 Zn finger 296..315 CDD:275368 7/19 (37%)
C2H2 Zn finger 323..343 CDD:275368 7/20 (35%)
C2H2 Zn finger 351..371 CDD:275368 7/46 (15%)
zf-H2C2_2 364..388 CDD:463886 8/25 (32%)
C2H2 Zn finger 379..399 CDD:275368 6/20 (30%)
zf-H2C2_2 391..416 CDD:463886 8/30 (27%)
C2H2 Zn finger 407..424 CDD:275368 5/21 (24%)
Blue background indicates that the domain is not in the aligned region.

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