DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9609 and CG6813

DIOPT Version :10

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001163590.1 Gene:CG6813 / 41396 FlyBaseID:FBgn0037923 Length:294 Species:Drosophila melanogaster


Alignment Length:249 Identity:57/249 - (22%)
Similarity:77/249 - (30%) Gaps:80/249 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPGTQIASDSDMETALEEFKQRQGRRNSIGSAKYACSMPKCEATFKRLDQLDRHEYHHTGIKKH 65
            ||...::::    .|:|...|...|     |:..|.|  |.|............|...|||||..
  Fly   117 MPSAEKVSA----PTSLNHQKSIGG-----GTGPYVC--PDCGRIINNKSNFQEHTLRHTGIKNF 170

  Fly    66 ACSYEGCDKTYSIVTHLKRHLRSTHERPESAAKKTVKCALEECSKMFISVSNMTRHMR-ETHESP 129
            .|.:..|::::                   |.:|                 .:|.|.| .|.|.|
  Fly   171 HCVFLNCERSF-------------------ATRK-----------------ELTSHTRIHTGEQP 199

  Fly   130 KVYPCSQCSAKFSQKLKLKRHEIREHTLEYPYSCSKCSRGFYQQWQCQSHEPSCKLYECPGCPLQ 194
              |.|..|..:||.....:.|. |.|..|..|.|..|.:.|...                ||   
  Fly   200 --YVCVYCPRRFSSSGARQEHH-RRHRNERRYECDTCKKSFVSS----------------GC--- 242

  Fly   195 FDKWTLYTKHCRDSLHGKNRHKCDRCDSAFDKPSELKRHLEV---KHKEAAQTD 245
                  ..||....:..:| |.|..|...|.:.|.|..||..   |.||...|:
  Fly   243 ------LRKHKMIHVDARN-HYCYVCQKHFKRISHLMTHLSSNIHKRKEEKLTE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 COG5048 38..309 CDD:227381 48/212 (23%)
C2H2 Zn finger 40..59 CDD:275368 3/18 (17%)
zf-C2H2_8 67..150 CDD:464935 15/83 (18%)
C2H2 Zn finger 67..90 CDD:275368 2/22 (9%)
C2H2 Zn finger 106..126 CDD:275368 3/20 (15%)
C2H2 Zn finger 134..155 CDD:275368 6/20 (30%)
C2H2 Zn finger 188..210 CDD:275368 4/21 (19%)
C2H2 Zn finger 217..237 CDD:275368 7/22 (32%)
C2H2 Zn finger 253..276 CDD:275368
C2H2 Zn finger 283..302 CDD:275368
CG6813NP_001163590.1 zf-AD 5..76 CDD:462262
C2H2 Zn finger 144..164 CDD:275368 4/21 (19%)
C2H2 Zn finger 172..194 CDD:275368 7/57 (12%)
UFD2 <256..>294 CDD:227443 12/34 (35%)
C2H2 Zn finger 258..280 CDD:275368 7/21 (33%)
Blue background indicates that the domain is not in the aligned region.

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