DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9609 and CG10543

DIOPT Version :9

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001369100.1 Gene:CG10543 / 37379 FlyBaseID:FBgn0034570 Length:1666 Species:Drosophila melanogaster


Alignment Length:434 Identity:97/434 - (22%)
Similarity:146/434 - (33%) Gaps:112/434 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 IASDSDMETALEEFKQRQGRRN------SIGSAK----YACSMPKCEATFKRLDQLDRHEYHHTG 61
            |...|...|:|:....:.|..:      :.||.|    |.|.:  |..::::...|..|...|.|
  Fly   687 IDGGSSSSTSLQAPPSQHGSGSGGSGGQTPGSKKDKPSYNCLL--CPKSYRKRKSLLDHYKMHPG 749

  Fly    62 IKKHACSYEGCDKTYSIVTHLKRHLRSTHERPESAAKKTVKCALEECSKMFISVSNMTRHMRETH 126
            . .|.|.....:....|:    .|.|:.|       .|......|.|.:.:........|: |:|
  Fly   750 Y-CHDCGQRNGNTLEEII----HHNRTMH-------VKEFPFVCETCGESYSRKQQFHAHV-ESH 801

  Fly   127 ESP--KVYPCSQCSAKFSQKLKLKRH-EIREHTLEYPYSCSKCSRGFYQQWQCQSHEPSCKLYEC 188
            ...  |.:||.:|..||.|| ||::| |...|..:... |..|...|..:.....|         
  Fly   802 NKKEIKTFPCGECGLKFPQK-KLQQHFEETGHKADGAI-CEVCGEEFQSKNALYQH--------- 855

  Fly   189 PGCPLQFDKWTLYTKHCRDSLHGKNRHKCDRCDSAFDKPSELKRHLEVKHKEAAQTDECATSFTC 253
                       :...|.||     |..:|..|.:.|...:.|:||::: |.|..:...|      
  Fly   856 -----------IIRVHKRD-----NFFECHICHNRFTLKANLERHVQL-HTEIKRPYVC------ 897

  Fly   254 NEEGCGKSYSYLRNLRQHMLTAHSGRRFECQALDCGRCFSSAQNLARHL---------------- 302
              :.||.||.....|::|...||.... ||:...||:.|.||::|.|||                
  Fly   898 --DLCGSSYFTYPALKEHYSNAHVDVS-ECKCTLCGKRFGSAKSLQRHLPSHSEERPHCCNYCDQ 959

  Fly   303 -------LRDHKDGATKKELKAKKKDKS---KTGE----------------GGKTKSTSRKRRRD 341
                   |..||......|....||.|.   ||.|                ..|..:||:.:.:.
  Fly   960 TFKWKTHLVRHKQTMHGNEPPPPKKGKQRFPKTSEEDMGSLPDMPGPPPVKASKKAATSKAKAQA 1024

  Fly   342 AGRSKHSRLSKLACLQLDKEDDEAVRERQPLVLEKITQSLKDDP 385
            |..:     :..|..|..::...|.....|..:......|:.||
  Fly  1025 AAAA-----AAAASSQQQQQKGSAATPTPPPPVSTTPGCLQQDP 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 C2H2 Zn finger 40..59 CDD:275368 3/18 (17%)
zf-C2H2_8 67..150 CDD:292531 21/84 (25%)
C2H2 Zn finger 67..90 CDD:275368 4/22 (18%)
C2H2 Zn finger 106..126 CDD:275368 4/19 (21%)
C2H2 Zn finger 134..155 CDD:275368 10/21 (48%)
C2H2 Zn finger 188..210 CDD:275368 3/21 (14%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..276 CDD:275368 6/22 (27%)
C2H2 Zn finger 283..302 CDD:275368 8/18 (44%)
CG10543NP_001369100.1 C2H2 Zn finger 727..747 CDD:275368 4/21 (19%)
C2H2 Zn finger 751..773 CDD:275368 5/25 (20%)
C2H2 Zn finger 781..801 CDD:275368 4/20 (20%)
PHA00733 <804..860 CDD:177301 17/77 (22%)
C2H2 Zn finger 811..827 CDD:275368 8/16 (50%)
C2H2 Zn finger 839..860 CDD:275368 4/40 (10%)
C2H2 Zn finger 868..888 CDD:275368 6/20 (30%)
C2H2 Zn finger 897..913 CDD:275368 6/23 (26%)
C2H2 Zn finger 926..946 CDD:275368 9/19 (47%)
C2H2 Zn finger 954..975 CDD:275368 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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