DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9609 and zf30C

DIOPT Version :9

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_477301.1 Gene:zf30C / 34292 FlyBaseID:FBgn0270924 Length:777 Species:Drosophila melanogaster


Alignment Length:379 Identity:97/379 - (25%)
Similarity:147/379 - (38%) Gaps:87/379 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPGTQIASDSDME---TALEEFKQRQGRR-----NSIGSAKYACSMPKCEATFKRLDQLDRHEYH 58
            |||.:.......|   ....::::|...|     :|.|:.|....:.|.|.. :||..:::.|  
  Fly   339 PPGPRKRGRPPKEKIPVVKRKYRKRNAPRSPSPDDSSGTPKRVAKISKKELK-ERLKMINKME-- 400

  Fly    59 HTGIKKHACSYEGCDKTYSIVTHLKRHLRSTHERPESAAKKTVK-----CALEE-------CSKM 111
                |...|.:  |.|.|.|....::|||..|:..|:..|:..|     ..|:|       |||:
  Fly   401 ----KSWKCPH--CVKIYHIRKPYEKHLRDDHKLNEAEMKEIFKDVDVHAKLDEEVFKCPICSKI 459

  Fly   112 FISVSNMTRHMRETHESPKV---YPCSQCSAKFSQKLK--------------------------- 146
            ::....:..||:...|..|:   .|| .|:..|:.|.:                           
  Fly   460 YLVEKRLVTHMKVHGEDGKLTFKCPC-YCNLFFATKEQATEHARAQHKELLYCEKCDKYMTGHDS 523

  Fly   147 LKRHEIREHTLEYPYS------CSKCSRGFYQQWQCQSHEPS-C---KLYECPGCPLQFDKWTLY 201
            ||.||...|:.:.|.|      |.||.:.|..:.....|..| |   .||.|..|........:.
  Fly   524 LKNHERNFHSKKEPRSQQRNLICDKCGKKFTGRTSLSDHVRSDCGRLPLYGCSVCGKHLSTAGIL 588

  Fly   202 TKHCRDSLH-GKNRHKCDRCDSAFDKPSELKRHLEVKHKEAAQTDECATSFTCNEEGCGKSYSYL 265
            ..|.  .|| ....::||:|...|...::.|.||:.:|     ||  ...:.|:.  |.|.|.|.
  Fly   589 KTHM--LLHKADTPYQCDKCGKTFKVKAQYKSHLKTRH-----TD--YKPYKCHL--CPKEYPYR 642

  Fly   266 RNLRQHMLTAHSG-RRFECQALDCGRCFSSAQNLARHLLRDHKDGATKKELKAK 318
            .:|..|| |.|:| :||.|.  :||:.|:...||..| .:.|.|...:..|.||
  Fly   643 ESLLTHM-TVHTGIKRFLCN--NCGKRFTCISNLQAH-RKVHADTCGQLPLNAK 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 C2H2 Zn finger 40..59 CDD:275368 5/18 (28%)
zf-C2H2_8 67..150 CDD:292531 28/124 (23%)
C2H2 Zn finger 67..90 CDD:275368 8/22 (36%)
C2H2 Zn finger 106..126 CDD:275368 6/26 (23%)
C2H2 Zn finger 134..155 CDD:275368 8/47 (17%)
C2H2 Zn finger 188..210 CDD:275368 3/21 (14%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..276 CDD:275368 9/22 (41%)
C2H2 Zn finger 283..302 CDD:275368 6/18 (33%)
zf30CNP_477301.1 C2H2 Zn finger 33..53 CDD:275368
C2H2 Zn finger 61..82 CDD:275368
C2H2 Zn finger 98..117 CDD:275368
C2H2 Zn finger 134..152 CDD:275368
C2H2 Zn finger 511..532 CDD:275370 4/20 (20%)
COG5048 <523..>672 CDD:227381 48/162 (30%)
C2H2 Zn finger 546..566 CDD:275368 5/19 (26%)
C2H2 Zn finger 575..595 CDD:275368 3/21 (14%)
C2H2 Zn finger 603..624 CDD:275368 7/20 (35%)
C2H2 Zn finger 632..652 CDD:275368 9/22 (41%)
C2H2 Zn finger 660..680 CDD:275368 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24409
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.