DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9609 and Gtf3a

DIOPT Version :9

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001107042.1 Gene:Gtf3a / 246299 RGDID:619746 Length:363 Species:Rattus norvegicus


Alignment Length:367 Identity:109/367 - (29%)
Similarity:164/367 - (44%) Gaps:59/367 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPPGTQIASDSDMETALEEFKQRQGRRNSIGSA--------KYACSMPKCEATFKRLDQLDRHEY 57
            |.|...:|......|..:.|.     |..:|.|        ::.||.|.|.|::.:..:||.|..
  Rat     1 MEPRVSVAEAVSSLTIADAFV-----RACVGPAPPRPALPSRFICSFPDCSASYNKAWKLDAHLC 60

  Fly    58 HHTGIKKHACSYEGCDKTYSIVTHLKRH-LRSTHERPESAAKKTVKCALEECSKMFISVSNMTRH 121
            .|||.:...|.||||.|.:....||.|| |..|.|:|       ..||...|::.|.:.||:.:|
  Rat    61 KHTGERPFVCDYEGCGKAFIRDYHLSRHILIHTGEKP-------FVCADNGCNQKFSTKSNLKKH 118

  Fly   122 MRETHESP-KVYPCS--QCSAKFSQKLKLKRHEIREHTLEYPYSCSK--CSRGFYQQWQCQSHEP 181
            :...||:| |.|.|:  .|...|.:..:|:.|:. :||.|..:.|:.  |.:.|....:.:.|..
  Rat   119 IERKHENPQKQYVCNFEGCKKAFKKHQQLRTHQC-QHTNEPLFRCTHEGCGKHFASPSRLKRHGK 182

  Fly   182 SCKLYEC-PGCPLQFDKWTLYTKHCRDSLHGKNRHKCDRCDSAFDKPSELKRHLEVKHKEAAQTD 245
            ..:.|.| .||......||...||.|:: | |....|..|...|.:...||:|::.   .|.:.|
  Rat   183 VHEGYLCQKGCSFVGKTWTELLKHTREA-H-KEEVTCTVCQKMFKRKDHLKQHMKT---HAPERD 242

  Fly   246 ECATSFTCNEEGCGKSYSYLRNLRQHMLTAHSGRR-FECQALDCGRCFSSAQNLARHLLRDHKDG 309
                .:.|..|||.::|:.:.||:.|:|:.|..:| |.|:...||:.|:..|:|.||.:....| 
  Rat   243 ----VYRCPREGCARTYTTVFNLQSHILSFHEEKRPFVCEHAGCGKTFAMKQSLMRHSVVHDPD- 302

  Fly   310 ATKKELKAKKKDKSKTGEGGKTKSTSRKRRRDAGRSKHSRLS 351
              ||.:|.|.:             ..|:|     ||..||||
  Rat   303 --KKRMKLKVR-------------PPRER-----RSLASRLS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 C2H2 Zn finger 40..59 CDD:275368 6/18 (33%)
zf-C2H2_8 67..150 CDD:292531 30/86 (35%)
C2H2 Zn finger 67..90 CDD:275368 11/23 (48%)
C2H2 Zn finger 106..126 CDD:275368 5/19 (26%)
C2H2 Zn finger 134..155 CDD:275368 5/22 (23%)
C2H2 Zn finger 188..210 CDD:275368 8/22 (36%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 253..276 CDD:275368 9/22 (41%)
C2H2 Zn finger 283..302 CDD:275368 7/18 (39%)
Gtf3aNP_001107042.1 zinc finger 40..62 8/21 (38%)
C2H2 Zn finger 43..62 CDD:275368 6/18 (33%)
COG5048 <62..185 CDD:227381 41/130 (32%)
zinc finger 70..92 11/21 (52%)
C2H2 Zn finger 70..92 CDD:275368 11/21 (52%)
zinc finger 100..123 7/22 (32%)
C2H2 Zn finger 100..123 CDD:275368 7/22 (32%)
zinc finger 132..154 5/22 (23%)
C2H2 Zn finger 135..154 CDD:275368 4/19 (21%)
zinc finger 162..184 4/21 (19%)
C2H2 Zn finger 162..184 CDD:275368 4/21 (19%)
zinc finger 189..211 8/22 (36%)
zf-C2H2 216..237 CDD:395048 6/23 (26%)
zinc finger 217..237 6/22 (27%)
C2H2 Zn finger 217..237 CDD:275368 6/22 (27%)
SFP1 <243..295 CDD:227516 18/51 (35%)
zinc finger 246..269 9/22 (41%)
C2H2 Zn finger 246..269 CDD:275368 9/22 (41%)
zinc finger 277..299 8/21 (38%)
C2H2 Zn finger 277..299 CDD:275368 8/21 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 301..363 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BI01
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55630
Inparanoid 1 1.050 141 1.000 Inparanoid score I4405
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D500805at33208
OrthoFinder 1 1.000 - - FOG0004124
OrthoInspector 1 1.000 - - oto96131
orthoMCL 1 0.900 - - OOG6_104508
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.770

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