DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9609 and gtf3a

DIOPT Version :9

Sequence 1:NP_573161.1 Gene:CG9609 / 32663 FlyBaseID:FBgn0030787 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_002941582.2 Gene:gtf3a / 100144672 XenbaseID:XB-GENE-979623 Length:366 Species:Xenopus tropicalis


Alignment Length:360 Identity:105/360 - (29%)
Similarity:153/360 - (42%) Gaps:44/360 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KYACSMPKCEATFKRLDQLDRHEYHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTHERPESAAK 98
            :|.||...|.|.:.:..:|..|...|||.|...|..|||||.::.:.||.||..|      .:.:
 Frog    34 RYICSYADCNAAYNKNWKLQAHMCKHTGAKPFHCKAEGCDKEFTRLYHLTRHSLS------HSGE 92

  Fly    99 KTVKCALEECSKMFISVSNMTRHMRETHESPK--VYPC--SQCSAKFSQKLKLKRHEIREHTLEY 159
            |.|||..|.|...|.:...|.:|....| ||.  :|.|  ..|...|.:..:||.|:. .||.:.
 Frog    93 KNVKCESEGCDLKFCTKEIMKKHFNRFH-SPSSCIYVCHFENCGKMFKKHNQLKVHQF-THTQQL 155

  Fly   160 PYSCSK--CSRGFYQQWQCQSHEPSCKLYEC---PGCPLQFDKWTLYTKHCRDSLHGKNRHK--- 216
            ||.|:.  |...|....:.:.||.....|.|   ..|......||||.||..:.      |:   
 Frog   156 PYKCTHEGCDMRFNVPSRLKRHEKVHAGYPCKKDDTCLFVGKTWTLYLKHVAEC------HQEPL 214

  Fly   217 -CDRCDSAFDKPSELKRHLEVKHKEAAQTDECATSFTCNEEGCGKSYSYLRNLRQHMLTAHSGRR 280
             ||.|...|.....||.|.::..:|       .|.:.|..:||.::|:...||:.|:|..|..::
 Frog   215 VCDVCKRKFKHKDILKDHKKIHERE-------RTVYRCPRDGCDRTYTTAFNLQNHVLVFHEEQK 272

  Fly   281 -FECQALDCGRCFSSAQNLARH-LLRDHKDGATKKELKAKKKDKSKTGEGGKTKSTSRKRRRDAG 343
             |.|:...||:.|:..|:|.|| ::.|.:....|::....|:..:....|.|.....::...|.|
 Frog   273 PFACEHAGCGKTFAMKQSLERHSVVHDPEKRKLKEKCPRPKRSLASHLSGYKPPKGKKQTAADKG 337

  Fly   344 RSKHSRLSKLACLQLDKEDDEAVRERQPLVLEKIT 378
            ..|.....|      ||..|  ..:...|||||:|
 Frog   338 TGKTGSCGK------DKPSD--TEKNGSLVLEKLT 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9609NP_573161.1 C2H2 Zn finger 40..59 CDD:275368 4/18 (22%)
zf-C2H2_8 67..150 CDD:292531 29/86 (34%)
C2H2 Zn finger 67..90 CDD:275368 11/22 (50%)
C2H2 Zn finger 106..126 CDD:275368 5/19 (26%)
C2H2 Zn finger 134..155 CDD:275368 6/22 (27%)
C2H2 Zn finger 188..210 CDD:275368 8/24 (33%)
C2H2 Zn finger 217..237 CDD:275368 7/19 (37%)
C2H2 Zn finger 253..276 CDD:275368 8/22 (36%)
C2H2 Zn finger 283..302 CDD:275368 8/19 (42%)
gtf3aXP_002941582.2 C2H2 Zn finger 41..59 CDD:275368 4/17 (24%)
COG5048 <52..181 CDD:227381 45/136 (33%)
C2H2 Zn finger 67..89 CDD:275368 11/27 (41%)
C2H2 Zn finger 97..115 CDD:275368 5/17 (29%)
C2H2 Zn finger 132..151 CDD:275368 5/19 (26%)
C2H2 Zn finger 159..181 CDD:275368 5/21 (24%)
C2H2 Zn finger 216..236 CDD:275368 7/19 (37%)
SFP1 <242..294 CDD:227516 16/51 (31%)
C2H2 Zn finger 245..268 CDD:275368 8/22 (36%)
C2H2 Zn finger 276..298 CDD:275368 8/21 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55630
Inparanoid 1 1.050 141 1.000 Inparanoid score I4375
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D500805at33208
OrthoFinder 1 1.000 - - FOG0004124
OrthoInspector 1 1.000 - - oto102860
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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