DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL22 and AT4G28360

DIOPT Version :10

Sequence 1:NP_523379.2 Gene:mRpL22 / 32662 FlyBaseID:FBgn0030786 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_567805.1 Gene:AT4G28360 / 828951 AraportID:AT4G28360 Length:271 Species:Arabidopsis thaliana


Alignment Length:267 Identity:70/267 - (26%)
Similarity:103/267 - (38%) Gaps:86/267 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHKVIRQM----------------SQLRLQAP--QG--AALLRSADSS----------------- 28
            :..||||:                |...|::|  ||  .:|||.:.||                 
plant     8 LQTVIRQVGRRVKNSHISTANYSSSTRNLESPFSQGYLQSLLRPSYSSRPLYHHLQQLGISTSRQ 72

  Fly    29 ---SISPAISPVSPPALQSKSLHTAASAGMLCAKWNKYNYGPRKWLEYNKTVHPPQETDEE--PR 88
               |..|..||:|.|||....                                  :|.:::  |:
plant    73 LQASEEPVSSPLSSPALLGSG----------------------------------KEEEQKIIPK 103

  Fly    89 NAYVCHMRSNIKYSPDKMWYIAAFVRGMSVDEALKQLNFVLKKGATDVKETILEAQQIAVERHNV 153
            ...|..:..:||.||.|:..:||.||||.|::||.||...:|:.|..|...|..|:..|...|.:
plant   104 RQKVQAVLKSIKQSPKKVNLVAALVRGMRVEDALIQLQVTVKRAAQTVYRVIHAARANATHNHGL 168

  Fly   154 EYKSNLWIAESFVGKGRVFKGVRRHARGRFGKVEYKHCHYFVRLEEGEPPQ---------HYYQE 209
            : ...|.:||:|||||...|.|..||:||.|.:....|...|.:.|..|.:         |.:::
plant   169 D-PDRLLVAEAFVGKGLFGKKVAYHAKGRSGIISIPRCRLTVIVRETTPEEEAEIARLKVHNFKK 232

  Fly   210 PQTPEQQ 216
            ....|:|
plant   233 KSKRERQ 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL22NP_523379.2 Ribosomal_L22 94..198 CDD:459725 40/103 (39%)
AT4G28360NP_567805.1 Ribosomal_L22 109..212 CDD:459725 40/103 (39%)

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