DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL22 and rpl17

DIOPT Version :9

Sequence 1:NP_523379.2 Gene:mRpL22 / 32662 FlyBaseID:FBgn0030786 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001229966.1 Gene:rpl17 / 336641 ZFINID:ZDB-GENE-030131-8585 Length:184 Species:Danio rerio


Alignment Length:191 Identity:36/191 - (18%)
Similarity:65/191 - (34%) Gaps:62/191 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 EEPRNAYVCHMR-SNIKYSPDKMWYIAAFVRGMSVDEALKQLNFVLKKGATDVKETILEAQQIAV 148
            |.|..:  |..| ||::.........|..::||.:.:|.|.|           |:.|::.|.:..
Zfish     9 ENPTKS--CKSRGSNLRVHFKNTRETAQAIKGMHIRKANKYL-----------KDVIVKHQCVPF 60

  Fly   149 ERHN------VEYKSNLWIAESFVGKGRVF--------------KGV------------------ 175
            .|:|      .:.|.:.|....:..|...|              ||:                  
Zfish    61 RRYNGGVGRCAQAKQHDWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKM 125

  Fly   176 -RR--HARGRFGKVEYKHCHYFVRLEEGE-----PPQHYYQEPQTPEQQYESWMEQMRSRK 228
             ||  .|.||........||..:.|.|.|     |.:...|:.:..:::.:.  :::.:|:
Zfish   126 RRRTYRAHGRINPYMSSPCHIEMILTEKEQIVPKPEEEVSQKKKVSQKKLKK--QKLMARE 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL22NP_523379.2 Ribosomal_L22 95..197 CDD:278658 27/143 (19%)
rpl17NP_001229966.1 PTZ00178 1..163 CDD:240306 34/166 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0091
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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