DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mRpL22 and Rpl17

DIOPT Version :10

Sequence 1:NP_523379.2 Gene:mRpL22 / 32662 FlyBaseID:FBgn0030786 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001392894.1 Gene:Rpl17 / 319195 MGIID:2448270 Length:201 Species:Mus musculus


Alignment Length:450 Identity:74/450 - (16%)
Similarity:111/450 - (24%) Gaps:214/450 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 YCHLGADATTSVCCQALGNSPCEEEMT------------QGEGPSAL---TRFYYDASQRKCLAF 309
            ||....|    :.|.::..:|...|..            .|.|||.|   ..:.||...      
Mouse   111 YCQFAFD----LKCDSVCVNPYHYERVVSPGIDLSGLTLSGSGPSGLMVKDEYDYDGPP------ 165

  Fly   310 NYLGLKGNRNNFQSKEHCESTCPVWTNPCAIGQPIMTVGQKPFQ-------CHQGATCSTGYFCH 367
               .|.....:.|:.:|               .|...|.|:||.       ....::.|:..|  
Mouse   166 ---SLPSTEGHMQTIQH---------------PPSRAVTQEPFSTPALLPPAEGSSSASSSAF-- 210

  Fly   368 LGYDDATTVCCQSEGDPCSLVVKEGSGNHHLSRWFYNSNTRQCQPFTYTGQGGNENNFLLREHCE 432
                  :::...|...|.|::    ||:|        |:....|..:.||||..:|.|       
Mouse   211 ------SSIAVGSTTQPGSVL----SGSH--------SSDSLLQIASGTGQGSQQNGF------- 250

  Fly   433 ATCPVWINACPSGEPYLLPNGKPQPCDSANVNSCP---------LTHWCHPGPDASTTMCCPGKA 488
                      |.|:.... :..|....|.|.|..|         |.|  ||              
Mouse   251 ----------PPGQTSTY-HHNPTSSWSRNSNFTPSVPHHQNGHLQH--HP-------------- 288

  Fly   489 DPCTQTLAQGEGPLSVARFYFNAQSRTCDEFMFRGLKGNSNNFKSQEDCEKACPVQQNPCPITMS 553
                        |::....|:...    :|..|:.                  |:..:|.|    
Mouse   289 ------------PMAHPAHYWPVH----NEIAFQP------------------PISNHPAP---- 315

  Fly   554 SLKHSAKLVPCSATKSCPSQQWC---------HYGETKETTVCCPNAVDDPCTAPPRNPGVGEFH 609
                               :.||         ..|||.:....||....|....|          
Mouse   316 -------------------EYWCSIAYFEMDVQVGETFKVPSSCPIVTVDGYVDP---------- 351

  Fly   610 ATRWAFDGSARKCVPFEYRGMKGNSNNFLTRENCEKRCPVFQNPCKIGEPHIQNNQYMQC 669
                  .|..|.|:        |..:|....|..|:           ...||.....::|
Mouse   352 ------SGGDRFCL--------GQLSNVHRTEAIER-----------ARLHIGKGVQLEC 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL22NP_523379.2 Ribosomal_L22 94..198 CDD:459725
Rpl17NP_001392894.1 PTZ00178 45..182 CDD:240306 16/98 (16%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.