DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL22 and Rpl17

DIOPT Version :9

Sequence 1:NP_523379.2 Gene:mRpL22 / 32662 FlyBaseID:FBgn0030786 Length:233 Species:Drosophila melanogaster
Sequence 2:XP_017173407.1 Gene:Rpl17 / 319195 MGIID:2448270 Length:201 Species:Mus musculus


Alignment Length:178 Identity:35/178 - (19%)
Similarity:56/178 - (31%) Gaps:47/178 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 YNYGPRKWLEYNKTVHPPQETDEEPRNAYV-CHMRSNIKYSPD---------------------- 104
            |.:.|| |.....|...||....|...|.. .|:|...||..|                      
Mouse    26 YGHLPR-WFATLLTQKTPQNNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQ 89

  Fly   105 -KMWYIAAFVRGMSVDEALKQLNFVLKKGATDVKETILEAQQIAVERHNVEYKSNLWIAESFVGK 168
             |.|   .:.:|....::.:.|..:||...::.:...|:...:.:|...|.....:        :
Mouse    90 AKQW---GWTQGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKM--------R 143

  Fly   169 GRVFKGVRRHARGRFGKVEYKHCHYFVRLEEGEPPQHYYQEPQTPEQQ 216
            .|.::     |.||........||..:.|.|.|      |....||::
Mouse   144 RRTYR-----AHGRINPYMSSPCHIEMILTEKE------QIVPKPEEE 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL22NP_523379.2 Ribosomal_L22 95..197 CDD:278658 19/124 (15%)
Rpl17XP_017173407.1 PTZ00178 45..182 CDD:240306 28/158 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0091
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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