DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL22 and RpL17

DIOPT Version :9

Sequence 1:NP_523379.2 Gene:mRpL22 / 32662 FlyBaseID:FBgn0030786 Length:233 Species:Drosophila melanogaster
Sequence 2:NP_001284961.1 Gene:RpL17 / 31613 FlyBaseID:FBgn0029897 Length:186 Species:Drosophila melanogaster


Alignment Length:115 Identity:22/115 - (19%)
Similarity:42/115 - (36%) Gaps:20/115 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KQLNFVLK-----KGATDVKETILEAQQIAVERHNVEYKSNLWIAESFVGKGRVFKGVRRHARGR 182
            |...|:|:     :...|.|.  |:|.::.|  |:::           |.:.:..:.....|.||
  Fly    86 KSAEFLLQLLRNAEANADCKG--LDADRLVV--HHIQ-----------VNRAQCLRRRTYRAHGR 135

  Fly   183 FGKVEYKHCHYFVRLEEGEPPQHYYQEPQTPEQQYESWMEQMRSRKIINS 232
            ........||..|.|.|.|.......:.:..:::......|.:..|::.|
  Fly   136 INPYMSSPCHVEVILTEKEELVSKATDDEPAKKKLSKKKLQRQKEKMLRS 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL22NP_523379.2 Ribosomal_L22 95..197 CDD:278658 16/78 (21%)
RpL17NP_001284961.1 PTZ00178 1..162 CDD:240306 19/90 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0091
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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