Sequence 1: | NP_001162777.1 | Gene: | if / 32661 | FlyBaseID: | FBgn0001250 | Length: | 1396 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_016858111.1 | Gene: | ITGA10 / 8515 | HGNCID: | 6135 | Length: | 1181 | Species: | Homo sapiens |
Alignment Length: | 972 | Identity: | 236/972 - (24%) |
---|---|---|---|
Similarity: | 382/972 - (39%) | Gaps: | 230/972 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 37 PSY---VRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLIVGAPKFDTSRYQQGVTEAG--GVFK 96
Fly 97 CSLNDDDCKLVPFDSKGNNRNVDKEVVDRKSYQWLGATVATGRDSD----LVVACAPRY-VFHTM 156
Fly 157 TPSRAFRIDPVGTCFTSHNFEEFYEVSPCRTNNWGYHRQGSCQAG----FSAAINGNGSRLFIGA 217
Fly 218 PGSWYWQGQTYSIPPDAKFPFK-------PPLYQPFGTG--GMASSHDVTRPENQV--------- 264
Fly 265 -FSTSE----------------------------------------SASVNDDSYLGYSMVTGDF 288
Fly 289 DGDRSEDVAIGMPR---GGNLV-------GRIVVNRWNMANIFNITGRQIGEYFGYSLATSDVDG 343
Fly 344 DGLDD-LLIGAPMYTDPDNVEGKYDVGRVYILLQGGP---TEEKRWTTEHIRDGYHSKGRFGLAL 404
Fly 405 TTLGDVNGDGYGDFAVGAPY-DGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQLVEGAPYPRTFGF 468
Fly 469 ALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLISLDDRSCQLVRDHKK 533
Fly 534 VPCMLLTTCWSYTGRYLPEQLD------FDVS---WLLDAKKLLNPRMFFLRDEGKNIRNQTIRL 589
Fly 590 NYGQKYCLNETVYLLDKVQDKLTPLEVEARYNL-RSSRPLDPMVRHRRSILEPVIDQNREIVLRD 653
Fly 654 AINIQKNCGPDNICEPDLKLKVSTVD-----KYLF---GSPEPLVIEVFISNTNEDAFEAAFYMV 710
Fly 711 TPPDLQFRKLQQLGEKKDTPI--TCSPPTPENNHTLKCDIGNPL-ESGKIAHFKISLVPEEKYGS 772
Fly 773 SSSYDFYW---EANSTNLEKPGSEYDNKIRQSVGIWVDTDLDIKGTSLPDYQLYKADDY------ 828
Fly 829 --KELENATKEDDIGPQVVHIYEIRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQPETGG 888 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
if | NP_001162777.1 | Int_alpha | 46..110 | CDD:214549 | 15/65 (23%) |
Int_alpha | 275..>316 | CDD:214549 | 13/50 (26%) | ||
Int_alpha | 398..451 | CDD:214549 | 24/53 (45%) | ||
Int_alpha | 466..>497 | CDD:214549 | 12/30 (40%) | ||
Integrin_alpha2 | 499..893 | CDD:285619 | 93/422 (22%) | ||
DUF2756 | <1120..1178 | CDD:298627 | |||
ITGA10 | XP_016858111.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165141985 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |