Sequence 1: | NP_001162777.1 | Gene: | if / 32661 | FlyBaseID: | FBgn0001250 | Length: | 1396 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013466.1 | Gene: | itga6b / 541320 | ZFINID: | ZDB-GENE-050320-5 | Length: | 1085 | Species: | Danio rerio |
Alignment Length: | 1454 | Identity: | 339/1454 - (23%) |
---|---|---|---|
Similarity: | 530/1454 - (36%) | Gaps: | 506/1454 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LHCPITSLI-LLLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLIVGA 76
Fly 77 PKFDTSRYQQG-VTEAGGVFKCSLN--DDDCKLVPFDSKGNNRNVDKEVVDRKSYQWLGATVATG 138
Fly 139 RDSDLVVACAPRYVFHTMTPSRAFRIDPVGTCFTSHNFEEFYEVSP--------CRTNNWGYHRQ 195
Fly 196 GSCQAGFSAAINGNGSRLFIGAPGSWYWQG------QTYSIPPDAKFPFKPPLYQ--PFGTGGMA 252
Fly 253 SSHDVTRPENQVFSTSESASVNDDSYLGYSMVTGDFDGDRSE-DVAIGMPRGGNLVGRIVVNRWN 316
Fly 317 MANI------FNITGRQIGEYFGYSLATSDVDGDGLDDLLIGAPMYTDPDNVEGKYDVGRVYILL 375
Fly 376 QGGPTEEKRW---TTEHIRDGYHSKGRFGLALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFH 437
Fly 438 GSPMGPLAKPSQIIKSEQLVEGAPY-PRTFGFALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRP 501
Fly 502 VAAVNAETSFASNSKLISLDDRSCQLVRDHKKVPCMLLTTCWSYTGR---YLPE-QLDFDVSWLL 562
Fly 563 DAKKLLNPRMFFLRDEGKNIRNQT--IRL-NYGQKYCLNETVYLLDKVQDKLTPLEVEARYNLRS 624
Fly 625 SRPLDPMVRHRRSI----LEPVIDQNREIVLRDAIN-IQKNCGPDNICEPDLKLKVSTVDKYLFG 684
Fly 685 SPEP------------------------LVIEVFISNTNEDAFEAAFYMVTPPDLQFRKLQ-QLG 724
Fly 725 EKKDTPITCSPPTPENNHTLKCDIGNPLESGKIAHFKISLVPEEKYGSSSSYDFYWEANSTNLEK 789
Fly 790 PGSEYDNKIRQSVGIWVDT-----DLDIKGTSLPDYQLYKADDYKELENATKEDDIGPQVVHIYE 849
Fly 850 IRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQPETGGKIQCDDVAFNEYNLLLDEKLVKKSYL 914
Fly 915 QAQGAIWNSAQVSGQSSSSSSSGGASVHIEKARGEGFVRGVLVSNSTDAGDKLSPKQVEQR--RQ 977
Fly 978 EDTLEALGDASFVHRDRASQAVQEPQVNQTSFTTYSTSSSSSGSGAPSAQLRGHSTQGHIQMAGP 1042
Fly 1043 VQHTSSSSSSNYRSWPAQQQQQHQQLLLAGSGGSGLGSPVTFNDKSQFGGRNNNFHTGTLDLGTL 1107
Fly 1108 NRGNVDNELYRSQGQYQNPSQSLGQSQGQFQANANQGHYQGQNQAQFQARNPGFQGQTSYQGQTQ 1172
Fly 1173 YSGQPGGYQTHHVTYSSGSKPYYGRENEDFYDEDNLQQATPGHWSSSSSSSSSSGTRRLRRSNDK 1237
Fly 1238 DGATEKPLQIDLNSPCQSARCKSIRCVVTNLGTEDGDAAFVAIRARMVAKTMEKLASNVPLN-VS 1301
Fly 1302 TLAVANVTLLPFIGAPKDAIVKTHEIFYKAEPEPLQVPDVV------------PLWVVVLAACAG 1354
Fly 1355 ALIFLLLVWLLYKCGFFNRNRPTD 1378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
if | NP_001162777.1 | Int_alpha | 46..110 | CDD:214549 | 22/66 (33%) |
Int_alpha | 275..>316 | CDD:214549 | 13/41 (32%) | ||
Int_alpha | 398..451 | CDD:214549 | 28/52 (54%) | ||
Int_alpha | 466..>497 | CDD:214549 | 17/30 (57%) | ||
Integrin_alpha2 | 499..893 | CDD:285619 | 89/435 (20%) | ||
DUF2756 | <1120..1178 | CDD:298627 | 3/57 (5%) | ||
itga6b | NP_001013466.1 | Int_alpha | 37..98 | CDD:214549 | 22/66 (33%) |
Int_alpha | 254..>292 | CDD:214549 | 13/38 (34%) | ||
Int_alpha | 315..365 | CDD:214549 | 22/57 (39%) | ||
Int_alpha | 374..425 | CDD:214549 | 29/59 (49%) | ||
Integrin_alpha2 | 468..932 | CDD:285619 | 135/807 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170574992 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D325432at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |