DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment if and ITGA7

DIOPT Version :9

Sequence 1:NP_001162777.1 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster
Sequence 2:XP_005268896.1 Gene:ITGA7 / 3679 HGNCID:6143 Length:1181 Species:Homo sapiens


Alignment Length:1508 Identity:361/1508 - (23%)
Similarity:571/1508 - (37%) Gaps:516/1508 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SLILLLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLIVGAPKFDTSR 83
            ||::.|:...|..:|:|:...:|......|:||||:|:|:...    .:....|:||||:.....
Human    21 SLLVELLFSRAVAFNLDVMGALRKEGEPGSLFGFSVALHRQLQ----PRPQSWLLVGAPQALALP 81

  Fly    84 YQQGVTEAGGVFKC--SLNDDDCKLVPFDSKGNNRNVDKEVVDRKSYQWLGATVATGRDSDLVVA 146
            .|| ....||:|.|  ||.:.||..|..|...:.:...||      .||||.:|.:......:|.
Human    82 GQQ-ANRTGGLFACPLSLEETDCYRVDIDQGADMQKESKE------NQWLGVSVRSQGPGGKIVT 139

  Fly   147 CAPRYVFHTMTPSRAFRIDPVGTCFT-SHNFEEFYEVSP-----CRTNNWGYHRQGSCQAGFSAA 205
            ||.||.............|.:|.||. |.:.....|:..     |.....|:.:.|.||.|.:||
Human   140 CAHRYEARQRVDQILETRDMIGRCFVLSQDLAIRDELDGGEWKFCEGRPQGHEQFGFCQQGTAAA 204

  Fly   206 INGNGSRLFIGAPGSWYWQGQTYSIP------------PDAKFPFKPPLYQPFGTGG-------- 250
            .:.:...|..||||::.|:| |..:.            .|.          |:..||        
Human   205 FSPDSHYLLFGAPGTYNWKG-TARVELCAQGSADLAHLDDG----------PYEAGGEKEQDPRL 258

  Fly   251 ---MASSH---------DVTRPENQVFSTSESAS-----VND---DSYLGYSMVTGDFDG-DRSE 294
               .|:|:         |.:.|:..|:.|.:.|.     ..|   :||||:|:.:|  .| .|:|
Human   259 IPVPANSYFGLLFVTNIDSSDPDQLVYKTLDPADRLPGPAGDLALNSYLGFSIDSG--KGLVRAE 321

  Fly   295 DVAI--GMPRGGNLVGRIVVNRWNMANIF----NITGRQIGEYFGYSLATSDVDGDGLDDLLIGA 353
            :::.  |.|| .|..|.:|:.|.:.|:..    .::|.::...||||||.:|::.||..||::||
Human   322 ELSFVAGAPR-ANHKGAVVILRKDSASRLVPEVMLSGERLTSGFGYSLAVADLNSDGWPDLIVGA 385

  Fly   354 PMYTDPDNVEGKYDVGRVYILL-QGGPTEEKRWT-TEHIRDGYHSKGRFGLALTTLGDVNGDGYG 416
            |.:.:.....|    |.||:.| |||     .|. ...:|........||::|..|||:|.||:.
Human   386 PYFFERQEELG----GAVYVYLNQGG-----HWAGISPLRLCGSPDSMFGISLAVLGDLNQDGFP 441

  Fly   417 DFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQLVEGAPYPRTFGFALSGGLDMDGNTY 481
            |.|||||:||.   |.|:|:|||.:|.:|||||:::.|     |...::||::|||.||||||.|
Human   442 DIAVGAPFDGD---GKVFIYHGSSLGVVAKPSQVLEGE-----AVGIKSFGYSLSGSLDMDGNQY 498

  Fly   482 PDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLISLDDRSCQLVRDHKKVPCMLLTTCWSY- 545
            |||.||:. :|...:|::||:..|:.|.|.|..|  |.|:..:|  ...|.  .|:.|..|:|| 
Human   499 PDLLVGSL-ADTAVLFRARPILHVSHEVSIAPRS--IDLEQPNC--AGGHS--VCVDLRVCFSYI 556

  Fly   546 --TGRYLPE-QLDFDVSWLLDA---KKLLN--PRMFFLR---DEGKNIRNQTIRLNY-GQKYCLN 598
              ...|.|. .||:    :|||   ::|..  ||:.||.   :|.|:..:.|:.|.: ..:.|.:
Human   557 AVPSSYSPTVALDY----VLDADTDRRLRGQVPRVTFLSRNLEEPKHQASGTVWLKHQHDRVCGD 617

  Fly   599 ETVYLLDKVQDKLTPLEVEARYNLRSSR--------PLDPMVRHRRSILEPVIDQNREIVLRDAI 655
            ....|.:.|:|||..:.|...|:|::.|        .|.|:.        |:::.::....|..|
Human   618 AMFQLQENVKDKLRAIVVTLSYSLQTPRLRRQAPGQGLPPVA--------PILNAHQPSTQRAEI 674

  Fly   656 N-IQKNCGPDNICEPDLKL-------KVSTVD-----------KYLFG-SPEPLV-IEVFISN-- 697
            : :::.||.|.||:.:|:|       :||..:           ..||. |.:|:: :|:.::|  
Human   675 HFLKQGCGEDKICQSNLQLVRARFCTRVSDTEFQPLPMDVDGTTALFALSGQPVIGLELMVTNLP 739

  Fly   698 --------TNEDAFEAAFYMVTPPDLQFRKLQQLGEKKDTPITCSPPTPENNHTLKCDIGNPLES 754
                    ..:||.||...::.|..|.:..::.| :..:.|:..|   .||...::|::|||::.
Human   740 SDPAQPQADGDDAHEAQLLVMLPDSLHYSGVRAL-DPAEKPLCLS---NENASHVECELGNPMKR 800

  Fly   755 GKIAHFKISLVPEEKYGSSSSYDFYWEANSTNLEKPGSEYDNKIRQSVGIWVD-TDLDIKGTSLP 818
            |....|.:.|                   ||:                ||.:: |:|::      
Human   801 GAQVTFYLIL-------------------STS----------------GISIETTELEV------ 824

  Fly   819 DYQLYKADDYKELENATKEDDIGPQVVHIYEIRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQ 883
                       ||..||    |..|.:|....|         |.|||.||. :|.|         
Human   825 -----------ELLLAT----ISEQELHPVSAR---------ARVFIELPL-SIAG--------- 855

  Fly   884 PETGGKIQCDDVAFNEYNLLLDEKLVKKSYLQAQGAIWNSAQVSGQSSSSSSSGGASVHIEKARG 948
                              :.:.::|.....::.:.|:.:...|           |:.|..|    
Human   856 ------------------MAIPQQLFFSGVVRGERAMQSERDV-----------GSKVKYE---- 887

  Fly   949 EGFVRGVLVSNSTDAGDKLSPKQVEQRRQEDTLEALGDASFVHRDRASQAVQEPQVNQTSFTTYS 1013
                  |.|||                 |..:|..||.| |::                      
Human   888 ------VTVSN-----------------QGQSLRTLGSA-FLN---------------------- 906

  Fly  1014 TSSSSSGSGAPSAQLRGHSTQGHIQMAGPVQHTSSSSSSNYRSWPAQQQQQHQQLLLAGSGGSGL 1078
                                         :......::..:..:|.|.:.:..|    |.|..||
Human   907 -----------------------------IMWPHEIANGKWLLYPMQVELEGGQ----GPGQKGL 938

  Fly  1079 GSPVTFNDKSQFGGRNNNFHTGTLDLGTLNRGNVDNELYRSQ--GQYQNPSQSLGQSQGQFQANA 1141
            .||           |.|..|   ||:.:.:|...:.|....|  |:.|.||.|            
Human   939 CSP-----------RPNILH---LDVDSRDRRRRELEPPEQQEPGERQEPSMS------------ 977

  Fly  1142 NQGHYQGQNQAQFQARNPGFQGQTSYQGQTQYSGQPGGYQTHHVTYSSGSKPYYGRENEDFYDED 1206
                                                                             
Human   978 ----------------------------------------------------------------- 977

  Fly  1207 NLQQATPGHWSSSSSSSSSSGTRRLRRSNDKDGATEKPLQIDLNSPCQSARCKSIRCVVTNLGTE 1271
                    .|..||:                    ||...|.|:....:|.|....|.:.:... 
Human   978 --------WWPVSSA--------------------EKKKNITLDCARGTANCVVFSCPLYSFDR- 1013

  Fly  1272 DGDAAFVAIRARMVAKT-MEKLASNVPLNVSTLAVANVTLLPFIG--APKDAIVKTHEIFYKAEP 1333
               ||.:.:..|:...| :|:.::...|.|  :..||:|:...|.  ..:||......:.|.   
Human  1014 ---AAVLHVWGRLWNSTFLEEYSAVKSLEV--IVRANITVKSSIKNLMLRDASTVIPVMVYL--- 1070

  Fly  1334 EPLQ-VPDVVPLWVVVLAACAGALIFLLLVWLLYKCGFFNRNR------PTDHS-----QERQP- 1385
            :|:. |.:.||.||::||..||.|:..|||.||:|.|||.|.:      |..|:     ::||. 
Human  1071 DPMAVVAEGVPWWVILLAVLAGLLVLALLVLLLWKMGFFKRAKHPEATVPQYHAVKIPREDRQQF 1135

  Fly  1386 --------LRNGY 1390
                    |||.:
Human  1136 KEEKTGTILRNNW 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ifNP_001162777.1 Int_alpha 46..110 CDD:214549 23/65 (35%)
Int_alpha 275..>316 CDD:214549 17/46 (37%)
Int_alpha 398..451 CDD:214549 29/52 (56%)
Int_alpha 466..>497 CDD:214549 18/30 (60%)
Integrin_alpha2 499..893 CDD:285619 102/446 (23%)
DUF2756 <1120..1178 CDD:298627 6/59 (10%)
ITGA7XP_005268896.1 Int_alpha 48..109 CDD:214549 23/65 (35%)
Int_alpha 304..>345 CDD:214549 16/43 (37%)
Int_alpha 362..415 CDD:214549 23/61 (38%)
Int_alpha 421..473 CDD:214549 29/54 (54%)
Int_alpha 483..>522 CDD:214549 21/39 (54%)
Integrin_alpha2 515..1006 CDD:285619 149/818 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10671
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D325432at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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