DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment if and ITGA3

DIOPT Version :10

Sequence 1:NP_523378.2 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_002195.1 Gene:ITGA3 / 3675 HGNCID:6139 Length:1051 Species:Homo sapiens


Alignment Length:1475 Identity:322/1475 - (21%)
Similarity:513/1475 - (34%) Gaps:570/1475 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 ALHCPITSLILLLIAMSAHG-----YNIDLPSYVRF---RQSSN--SMFGFSIAMHKGRSGFYGN 66
            |...|...|..|.:.::|.|     :|:|    .||   :::.|  |:||:|:|:|:...    .
Human     8 APRAPRLMLCALALMVAAGGCVVSAFNLD----TRFLVVKEAGNPGSLFGYSVALHRQTE----R 64

  Fly    67 QNNVSLIVGAPKFDTSRYQQGVT-EAGGVFKCSL--NDDDCKLVPFDSKGN-NRNVDKEVVDRKS 127
            |....|:.|||:  ......|.| ..|.|:.|.|  :.|||:.:....|.: ..::.:::     
Human    65 QQRYLLLAGAPR--ELAVPDGYTNRTGAVYLCPLTAHKDDCERMNITVKNDPGHHIIEDM----- 122

  Fly   128 YQWLGATVATGRDSDLVVACAPRYVFHTMTPSRAFRIDPVGTCFTSHNFEEF--------YEVSP 184
              |||.|||:...:..|:.||.||.....:.|...| ..||.|:...|..|.        |....
Human   123 --WLGVTVASQGPAGRVLVCAHRYTQVLWSGSEDQR-RMVGKCYVRGNDLELDSSDDWQTYHNEM 184

  Fly   185 CRTNNWGYHRQGSCQAGFSAAINGNGSRLFIGAPGSWYWQGQTYSIPPD----AKFPFKPPLYQP 245
            |.:|. .|...|.||.|.|.....|  .::.||||::.|:|.:|.|...    :::.:|.     
Human   185 CNSNT-DYLETGMCQLGTSGGFTQN--TVYFGAPGAYNWKGNSYMIQRKEWDLSEYSYKD----- 241

  Fly   246 FGTGGMASSHDVTRPENQVFSTSESASVNDDSYLGYSMVTGDFD-GDRSEDVAIGMPR------- 302
                          ||:|           .:.|:||:|..|.|. ..::..:..|.||       
Human   242 --------------PEDQ-----------GNLYIGYTMQVGSFILHPKNITIVTGAPRHRHMGAV 281

  Fly   303 -------GGNLVGRIVVNRWNMANIFNITGRQIGEYFGYSLATSDVDGDGLDDLLIGAPMYTDPD 360
                   ||:|..|.|           :.|.|:|.|||.::|.:|::.||..|||:|||.|    
Human   282 FLLSQEAGGDLRRRQV-----------LEGSQVGAYFGSAIALADLNNDGWQDLLVGAPYY---- 331

  Fly   361 NVEGKYDV-GRVYI--------------LLQGGPTEEKRWTTEHIRDGYHSKGRFGLALTTLGDV 410
             .|.|.:| |.:|:              ||..||                |...|||::.::||:
Human   332 -FERKEEVGGAIYVFMNQAGTSFPAHPSLLLHGP----------------SGSAFGLSVASIGDI 379

  Fly   411 NGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQLVEGAPYPRTFGFALSGGLD 475
            |.||:.|.|||||:   ||.|.|||:|.|..|.|.:|.|:|..|:|  |.|...|||::|||.:|
Human   380 NQDGFQDIAVGAPF---EGLGKVYIYHSSSKGLLRQPQQVIHGEKL--GLPGLATFGYSLSGQMD 439

  Fly   476 MDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLIS----LDDRSCQLVRDHKKVPC 536
            :|.|.||||.||:. ||.:.:.::|||..:..:|       |:.    ||...|      ....|
Human   440 VDENFYPDLLVGSL-SDHIVLLRARPVINIVHKT-------LVPRPAVLDPALC------TATSC 490

  Fly   537 MLLTTCWSY-----TGRYLPEQLDFDVSWLLDA-KKLLNPRMFFLRDEGKNIRNQTIRLNYGQKY 595
            :.:..|::|     ...|   :.:..:::.|:| :....||:.|...|......   ..:..:..
Human   491 VQVELCFAYNQSAGNPNY---RRNITLAYTLEADRDRRPPRLRFAGSESAVFHG---FFSMPEMR 549

  Fly   596 CLNETVYLLDKVQDKLTPLEVEARYNLRSSRPLDPMVRHRRSILEPVIDQNREIVLRDAINIQKN 660
            |....:.|:|.::|||.|:.:...|:|....|..|.:..|.....|:::|.:.:.....:..||.
Human   550 CQKLELLLMDNLRDKLRPIIISMNYSLPLRMPDRPRLGLRSLDAYPILNQAQALENHTEVQFQKE 614

  Fly   661 CGPDNICEPDLKLKVSTVDK--------YLFGSPEPLVIEVFISNT------NEDAFEAAFYMVT 711
            |||||.||.:|:::.:.|.:        ........|::.:.::||      .|||.||...:|.
Human   615 CGPDNKCESNLQMRAAFVSEQQQKLSRLQYSRDVRKLLLSINVTNTRTSERSGEDAHEALLTLVV 679

  Fly   712 PPDLQFRKLQQLGEKKDTPITCSPPTPENNHTLKCDIGNPLESGKIAHFKISLVPEEKYGSSSSY 776
            ||.|....::       .|..|     :.|.|:.|::|||.:..:.....|:.            
Human   680 PPALLLSSVR-------PPGAC-----QANETIFCELGNPFKRNQRMELLIAF------------ 720

  Fly   777 DFYWEANSTNLEKPGSEYDNKIRQSVGIWVDT-DLDIKGTSLPDYQLYKADDYKELENATKEDDI 840
                                   :.:|:.:.| ||.:        ||       :|..::.:|::
Human   721 -----------------------EVIGVTLHTRDLQV--------QL-------QLSTSSHQDNL 747

  Fly   841 GPQVVHIYEIRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQPETGGKIQCDDVAFNEYNLLLD 905
            .|.::                                                       .||:|
Human   748 WPMIL-------------------------------------------------------TLLVD 757

  Fly   906 EKLVKKSYLQAQGAIWNSAQVSGQSSSSSSSGGASVHIEKARGEGFVRGVLVSNSTDAGDKLSPK 970
            ..|                    |:|.|         :...|.:.|..|.::..|   |.|    
Human   758 YTL--------------------QTSLS---------MVNHRLQSFFGGTVMGES---GMK---- 786

  Fly   971 QVEQRRQEDTLEALGDASFVHRDRASQAVQEPQVNQTSFTTYSTSSSSSGSGAPSAQLRGHSTQG 1035
                     |:|.:|          |....|.||                               
Human   787 ---------TVEDVG----------SPLKYEFQV------------------------------- 801

  Fly  1036 HIQMAGPVQHTSSSSSSNYRSWPAQQQQQHQQLLLAGSGGSGLGSPVTFNDKSQFGGRNNNFHTG 1100
                 ||:                            |.|..||                     |
Human   802 -----GPM----------------------------GEGLVGL---------------------G 812

  Fly  1101 TLDLGTLNRGNVDNELYRSQGQYQNPSQSLGQSQGQFQANANQGHYQGQNQAQFQARNPGFQGQT 1165
            ||.||.             :..|:       .|.|::..                          
Human   813 TLVLGL-------------EWPYE-------VSNGKWLL-------------------------- 831

  Fly  1166 SYQGQTQYSGQPGGYQTHHVTYSSGSKPYYGRENEDFYDEDNLQQATPGHWSSSSSSSSSSGTRR 1230
                          |.|....:.:||.|.  |...|..:..||..:.||...||        .:|
Human   832 --------------YPTEITVHGNGSWPC--RPPGDLINPLNLTLSDPGDRPSS--------PQR 872

  Fly  1231 LRRSNDKDG---------ATEKPLQIDLNSPCQSAR--CKSIRC------VVTNLGTEDGDAAFV 1278
            .||..|..|         |..|..:.:....|.:.|  |..:.|      ||||          |
Human   873 RRRQLDPGGGQGPPPVTLAAAKKAKSETVLTCATGRAHCVWLECPIPDAPVVTN----------V 927

  Fly  1279 AIRARMVAKT-------MEKLASN------VPLNVSTLAVANVTLLPFIGAPKDAIVKTHEIFYK 1330
            .::||:...|       .:::..|      :..::.|:.:.|.|....:....:.:.        
Human   928 TVKARVWNSTFIEDYRDFDRVRVNGWATLFLRTSIPTINMENKTTWFSVDIDSELVE-------- 984

  Fly  1331 AEPEPLQVPDVVPLWVVVLAACAGALIFLLLVWLLYKCGFFNRNR 1375
                  ::|..:.||:|::|..||.|:..|::.||:|||||.|.|
Human   985 ------ELPAEIELWLVLVAVGAGLLLLGLIILLLWKCGFFKRAR 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ifNP_523378.2 Int_alpha 46..110 CDD:214549 21/68 (31%)
Int_alpha 275..>316 CDD:214549 14/55 (25%)
Int_alpha 398..451 CDD:214549 26/52 (50%)
Int_alpha 466..>497 CDD:214549 16/30 (53%)
Integrin_alpha2 500..892 CDD:462478 73/416 (18%)
Glutenin_hmw <1121..1216 CDD:367362 14/94 (15%)
ITGA3NP_002195.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 38..103 21/70 (30%)
Int_alpha 48..108 CDD:214549 20/65 (31%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 110..171 18/68 (26%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 185..235 17/52 (33%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 236..292 15/85 (18%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 293..354 24/76 (32%)
Int_alpha 304..352 CDD:214549 20/52 (38%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 356..411 28/73 (38%)
Int_alpha 365..417 CDD:214549 27/54 (50%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 415..477 28/71 (39%)
Int_alpha 430..481 CDD:214549 21/58 (36%)
Integrin_alpha2 463..916 CDD:462478 130/798 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 855..889 11/41 (27%)
Interaction with HPS5 1015..1021 5/5 (100%)
GFFKR motif 1017..1021 3/3 (100%)

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