| Sequence 1: | NP_001162777.1 | Gene: | if / 32661 | FlyBaseID: | FBgn0001250 | Length: | 1396 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006230331.1 | Gene: | Itgal / 308995 | RGDID: | 631424 | Length: | 1161 | Species: | Rattus norvegicus |
| Alignment Length: | 1187 | Identity: | 275/1187 - (23%) |
|---|---|---|---|
| Similarity: | 432/1187 - (36%) | Gaps: | 382/1187 - (32%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 11 MALHCPITSLIL--LLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLI 73
Fly 74 VGAP-------------------------KFDTSRY--QQGVTEA--GGVFKCSLN-DDDCKLVP 108
Fly 109 FDS-------------------------KGN---------NRNVDK----EVVD------RK--- 126
Fly 127 -SYQWLGATVAT--------------GRDSDLVVA-CAPRY------------VFHTMTPSRAFR 163
Fly 164 IDP------------------------------VGTCFTS-------HNF-----EEFYEVSP-- 184
Fly 185 -------CRTNNWGYHRQGSCQ---AGFSAAINGNG-------SRLFIGAPGSWYWQGQTYSIPP 232
Fly 233 D---AKFPFKPPLYQPFGTGGMASSHDVTRPENQVFSTSESASVNDDSYLGYSMVTGDFDGDRSE 294
Fly 295 D--VAIGMPRGGNLVGRIVV-------NRWNMANIFNITGRQIGEYFGYSLATSDVDGDGLDD-L 349
Fly 350 LIGAPMYTDPDNVEGKYDVGRVYIL------------LQGGPTEEKRWTTEHIRDGYHSKGRFGL 402
Fly 403 ALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQLVEGAPYPRTFG 467
Fly 468 FALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLISLDDRSCQLVRDHK 532
Fly 533 KVPCMLLTTCW-------SYTGRYLPEQLDFDVSWLLDAKKLLNPRMF--FLRDEGKNIRNQTIR 588
Fly 589 LNYGQKYCLNETVYLLDKVQDKLTPLEVEARYNL--RSSRPLDPM-VRHRRSILEPVIDQNREIV 650
Fly 651 LRDAINIQKNCGPDNICEPDLKLKVSTVDKYL-FGSPEPLVIEVFISNTNEDAFEAAFYMVTPPD 714
Fly 715 LQFRKLQQLGEKKDTPITCSPPTPENN---HTLKCDIGNPL-ESGKIAHFKI---SLVPEEKYGS 772
Fly 773 SSSYDFYWEANST-NLEKPGSEY--DNKIRQSVGIWVDTDLDIKGTSLPDYQLYKADDYKE-LEN 833
Fly 834 ATKEDDIGP------QVVHIYEIR-------NNRPSIIEEAEVFIHLPYE--------TIVGDPL 877
Fly 878 MYL----LNQPE--------TGGKIQCDDVAFNEYNLLLDEKLVKKSYLQAQGAIWNSAQVSGQS 930
Fly 931 -----SSSSSSGGASVH 942 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| if | NP_001162777.1 | Int_alpha | 46..110 | CDD:214549 | 17/93 (18%) |
| Int_alpha | 275..>316 | CDD:214549 | 12/49 (24%) | ||
| Int_alpha | 398..451 | CDD:214549 | 28/52 (54%) | ||
| Int_alpha | 466..>497 | CDD:214549 | 11/30 (37%) | ||
| Integrin_alpha2 | 499..893 | CDD:285619 | 107/450 (24%) | ||
| DUF2756 | <1120..1178 | CDD:298627 | |||
| Itgal | XP_006230331.1 | Int_alpha | 38..81 | CDD:214549 | 7/53 (13%) |
| vWFA | 151..320 | CDD:294047 | 23/168 (14%) | ||
| Int_alpha | 398..448 | CDD:214549 | 14/59 (24%) | ||
| Int_alpha | 453..499 | CDD:214549 | 20/51 (39%) | ||
| Int_alpha | 514..566 | CDD:214549 | 28/54 (52%) | ||
| Int_alpha | 577..621 | CDD:214549 | 16/45 (36%) | ||
| Integrin_alpha2 | 609..977 | CDD:285619 | 100/409 (24%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C166335721 | |
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 4 | 3.740 | |||||