DRSC/TRiP Functional Genomics Resources

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Protein Alignment if and Itgax

DIOPT Version :9

Sequence 1:NP_001162777.1 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster
Sequence 2:NP_067309.1 Gene:Itgax / 16411 MGIID:96609 Length:1169 Species:Mus musculus


Alignment Length:1095 Identity:247/1095 - (22%)
Similarity:382/1095 - (34%) Gaps:381/1095 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LHCPITSLILLLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGNQNNVSLIVGAP 77
            :.|...:.:|||..:|..|:|:|......|.. ..:.||.|:..:          ::..::||||
Mouse     1 MSCTWIAFLLLLGFVSCLGFNLDAEKLTHFHM-DGAEFGHSVLQY----------DSSWVVVGAP 54

  Fly    78 KFDTSRYQQGVTEAGGVFKCSLNDDDCKLVPFDSKGNNRNVDKEVVDRKSYQWLGATVATGRDSD 142
            |     ..:...:.||::||..:..:|:.:       :..|..|.|:..    ||.::|...:..
Mouse    55 K-----EIKATNQIGGLYKCGYHTGNCEPI-------SLQVPPEAVNIS----LGLSLAAATNPS 103

  Fly   143 LVVACAPRYVFHTM-----------------------------TPSR----AFRIDPVG------ 168
            .::||.|. |.||.                             .|.:    .|.||..|      
Mouse   104 WLLACGPT-VHHTCRENIYLTGLCFLLSSSFKQSQNFPTAQQECPKQDQDIVFLIDGSGSISSTD 167

  Fly   169 -------------------TCFTSHNFEEFYEVSPCRTNNW-----------------GY----- 192
                               |.|:...|.:::.|. ...||:                 ||     
Mouse   168 FEKMLDFVKAVMSQLQRPSTRFSLMQFSDYFRVH-FTFNNFISTSSPLSLLGSVRQLRGYTYTAS 231

  Fly   193 ------------------------------HRQGS------------------------------ 197
                                          .:||.                              
Mouse   232 AIKHVITELFTTQSGARQDATKVLIVITDGRKQGDNLSYDSVIPMAEAASIIRYAIGVGKAFYNE 296

  Fly   198 --------------------------------------------------------CQAGFSAAI 206
                                                                    .|.||||..
Mouse   297 HSKQELKAIASMPSHEYVFSVENFDALKDIENQLKEKIFAIEGTETPSSSTFELEMSQEGFSAVF 361

  Fly   207 NGNGSRLFIGAPGSWYWQGQTYSIPPDAKFPFKPPLYQPFGTGGMASSHDVTRPENQVFSTSESA 271
            ..:|.  .:||.||:.|.|..:..|.:.:..|.          .|:..::..|            
Mouse   362 TPDGP--VLGAVGSFSWSGGAFLYPSNMRPTFI----------NMSQENEDMR------------ 402

  Fly   272 SVNDDSYLGYSMVTGDFDGDRSEDVAIGMPRGGNLVGRIVV-----NRWNMANIFNITGRQIGEY 331
                |:|||||.....:.|..|  :.:|.||..: .|::|:     ..|...:  .:.|.|||.|
Mouse   403 ----DAYLGYSTALAFWKGVHS--LILGAPRHQH-TGKVVIFTQESRHWRPKS--EVRGTQIGSY 458

  Fly   332 FGYSLATSDVDGDGLDDL-LIGAPMYTDPDNVEGKYDVGRVYILLQGG-------PTEEKRW--- 385
            ||.||.:.|:|.||..|| |||.|.|               |...:||       |....||   
Mouse   459 FGASLCSVDMDRDGSTDLVLIGVPHY---------------YEHTRGGQVSVCPMPGVGSRWHCG 508

  Fly   386 TTEHIRDGYHSKGRFGLALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLA-KPSQ 449
            ||.|...| |..||||.|||.|||||||...|.|:|||.: .|.||.||||||:....:| .|||
Mouse   509 TTLHGEQG-HPWGRFGAALTVLGDVNGDSLADVAIGAPGE-EENRGAVYIFHGASRQDIAPSPSQ 571

  Fly   450 IIKSEQLVEGAPYPRTFGFALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASN 514
            .|.:.|:.....|   ||.:||||.|:..:...|||||  |..:|.:.::||:..|:....|...
Mouse   572 RISASQIPSRIQY---FGQSLSGGQDLTRDGLVDLAVG--SKGRVLLLRTRPILRVSPTVHFTPA 631

  Fly   515 SKLISLDDRSCQLVRDHKKVPCMLL---TTCW-------SYTGRYLPEQLDFDVSWLLDAKKLLN 569
            .  ||.....||    .:..|...|   |.|.       :..|. |...:.||::  ||..: |:
Mouse   632 E--ISRSVFECQ----EQVAPEQTLSDATVCLHIHESPKTQLGD-LRSTVTFDLA--LDHGR-LS 686

  Fly   570 PRMFFLRDEGKNI-RNQTIRLNYGQKYCLNETVYLLDKVQDKLTPLEVEARYNLRSSRPLDPMVR 633
            .|..|...:.:.: |.:|:.||   |:|.:..:.|...|:|.:||:.:...::| ...|:..:..
Mouse   687 TRAIFKETKTRALTRVKTLGLN---KHCESVKLLLPACVEDSVTPITLRLNFSL-VGVPISSLQN 747

  Fly   634 HRRSILEPVIDQNREIVLRDAINIQKNCGPDNICEPDLKLKVSTVD--KYLFGSPEPLVIEVFIS 696
                 |:|::..:.:.....::..:||||.|:||:.||.:.....|  ..:.||...|.::|.:|
Mouse   748 -----LQPMLAVDDQTYFTASLPFEKNCGADHICQDDLSVVFGFPDLKTLVVGSDLELNVDVTVS 807

  Fly   697 NTNEDAFEAAFYMVTPPDLQFRKLQQ----LGEKKDTPITCSPPTPENNHTLKCDIGNPLESGKI 757
            |..||::.....:..|..|.||::.:    |.:|:|     ........|:|             
Mouse   808 NDGEDSYGTTVTLFYPVGLSFRRVAEGQVFLRKKED-----QQWQRRGQHSL------------- 854

  Fly   758 AHFKISLVPEEKYG----SSSSYDFYWEANS------TNLEKPGSEYDNK--IRQSVGIWVDTDL 810
             |......|:...|    |.||....:...|      |....|.:|..::  :|..||    ::.
Mouse   855 -HLMCDSTPDRSQGLWSTSCSSRHVIFRGGSQMTFLVTFDVSPKAELGDRLLLRARVG----SEN 914

  Fly   811 DIKGTSLPDYQLYKADDY-------------KELENATKEDDIGPQVVHIYEIRN 852
            ::.||....:||.....|             |.|..:|.|.:....|.|.:::.|
Mouse   915 NVPGTPKTTFQLELPVKYAVYTMISSHDQFTKYLNFSTSEKEKTSVVEHRFQVNN 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ifNP_001162777.1 Int_alpha 46..110 CDD:214549 13/63 (21%)
Int_alpha 275..>316 CDD:214549 13/45 (29%)
Int_alpha 398..451 CDD:214549 32/53 (60%)
Int_alpha 466..>497 CDD:214549 14/30 (47%)
Integrin_alpha2 499..893 CDD:285619 88/396 (22%)
DUF2756 <1120..1178 CDD:298627
ItgaxNP_067309.1 FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 23..78 15/70 (21%)
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 79..138 12/70 (17%)
vWA_integrins_alpha_subunit 151..326 CDD:238746 14/175 (8%)
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 341..392 13/52 (25%)
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 393..444 15/69 (22%)
FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 445..505 24/76 (32%)
Int_alpha 455..505 CDD:214549 22/64 (34%)
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 508..566 33/59 (56%)
Int_alpha 518..573 CDD:214549 32/55 (58%)
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 571..631 22/64 (34%)
Integrin_alpha2 616..987 CDD:285619 88/396 (22%)
Integrin_alpha 1138..1152 CDD:278771
GFFKR motif 1140..1144
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832106
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3637
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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