DRSC/TRiP Functional Genomics Resources

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Protein Alignment if and itgae.2

DIOPT Version :10

Sequence 1:NP_523378.2 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster
Sequence 2:XP_003200076.2 Gene:itgae.2 / 100536705 ZFINID:ZDB-GENE-130530-671 Length:1098 Species:Danio rerio


Alignment Length:828 Identity:174/828 - (21%)
Similarity:313/828 - (37%) Gaps:204/828 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 VGTCFTSHNFEEFYEVSPCRTNNWGYHRQGSCQAGFSAAINGNGSRL--FIGAPGSWYWQGQTYS 229
            :||..|.|.|                 :....:||||:.:..|..::  ..||.|::.|.|..: 
Zfish   364 IGTEGTQHGF-----------------KLQLAEAGFSSHLLYNEQKVEALFGAVGAYDWSGGVF- 410

  Fly   230 IPPDAKFPFKPPLYQPFGTGGMASSHDVTRPENQVFSTSESASVNDDSYLGYSMVTGDFDGDRSE 294
                                        .:..|.|...::|.:.....|||||:.:....   |:
Zfish   411 ----------------------------LKSGNTVKFLNDSHNETKFGYLGYSVTSAHLP---SK 444

  Fly   295 DVAI-GMPRGGNLVGRIVVNRWNMANIFNITGRQIGEYFGYSLATSDVDGD-GLDDLLIGAPMYT 357
            .:.| |.|| .||.|.:.:  ::....:.:.|.|:|.|||..|...|::.| ..|.||:|||.: 
Zfish   445 TLYISGAPR-YNLTGAVFI--FDGLEKYVLHGDQVGSYFGSVLCALDINKDEHTDHLLVGAPHF- 505

  Fly   358 DPDNVEGKYDVGRVYILLQGGPTEEKRWTTEHIRDGYHSKGRFGLALTTLGDVNGDGYGDFAVGA 422
               ::.|  :.|:|.:.........:|...|...|...:..|||.|:.::||::.:.:.|.||||
Zfish   506 ---HLNG--EEGKVLVYKLNQEDRFERAPVELRGDAGQTFARFGAAIGSIGDIDNNKFNDVAVGA 565

  Fly   423 PYDGPEGRGVVYIFHGSPMGPLAKPSQIIKSEQLVEGAPYPRTFGFALSGGLDMDGNTYPDLAVG 487
            |.: ....|.|||:.|...|  .:.||.|..........|   ||.::|.| ....:..|.:|||
Zfish   566 PLE-TGSAGSVYIYSGFEEG--LRFSQKISPSDFGMKLVY---FGQSVSVG-PAPASDIPCIAVG 623

  Fly   488 AYSSDQVFIFKSRPVAAVNAETSFASNSKLISLDDRSCQLVRDHKKVP---CMLLTTCWSY-TGR 548
              |..:|.:|::.||..:         ...|.:|.....|.....|:.   .|.:|.|::. .|:
Zfish   624 --SLGRVSVFETIPVLII---------EPTIKIDTEVIALTHQMNKISSELSMKITVCFNIKKGK 677

  Fly   549 YLPEQ-----LDFDVSWLLDA----KKLLNPRMFFLRDEGKNIRNQTIRLNYGQKYCLNETVYLL 604
            ...|:     :|:::.  ||:    |:|.......::|        |..|...:: |.|:.:..|
Zfish   678 LKAEKSETQAVDYEID--LDSGASKKRLTCGADSLIKD--------TFTLTPDEE-CTNKKLTYL 731

  Fly   605 DKVQDKLTPLEVEARYNLRSSRPLDPMVRHRRSILEPVIDQNREIVLRDAINIQKNCGPDNICEP 669
            . ..|..:|::::..::|.|::...|:         .::|......:...|..:|:|...: |:|
Zfish   732 G-CFDCFSPIKIKLSFSLASNKNEAPI---------RILDAFTPTEVVKEIPFEKDCQAAD-CKP 785

  Fly   670 DLKLKVSTVDK--YLFGSPEPLVIEVFISNTNEDAFEAAFYMVTPPDLQFRKLQQLG--EKKDTP 730
            .:.|..|.:.:  ...|..:.|.|....:||.:.:::....:..|..|..||::...  .|.|..
Zfish   786 SITLSDSKISETTITMGETQNLNINFNFTNTGDPSYKTTLTLTYPSILSERKIEGAACPVKNDNQ 850

  Fly   731 ITCSPPTP-----------------ENNHTLKCDI---------GNPLESGKIAHFKIS-LVPEE 768
            |.|....|                 :.:...|.:|         |..|...:|..|.:. .:|..
Zfish   851 IQCHLQHPVFTRSAQTNLFISWQLNDKSDLKKSEIIANLTSQNNGIQLLDSRIYTFNVMYFLPIL 915

  Fly   769 KYGSSSSYDFYWEANSTNLEKPGS------------EYDNKIRQSVGIWVDTDLDIKGTSL---- 817
            ..||:       |.|...:|:.|.            :.:||...::.:.:...:|...|.|    
Zfish   916 IRGSA-------EPNILRIEEGGKGKTQPIKFKIQFQGENKYGATIDVIITIKMDTSKTDLHITK 973

  Fly   818 --PDYQLYKADDYKELENATKEDDIGPQVVHIYEIRNNRPSIIE-EAEVFIHLPYET---IVGDP 876
              |:..:.:|:..||..             :||:.......||. ||.||||...:|   |:.: 
Zfish   974 IQPEVCVLEANKVKEAS-------------YIYKCTLKELQIITIEANVFIHDVQDTSEKIIVE- 1024

  Fly   877 LMYLLNQPETGGKIQCDDVAFNEYNLL----LDEKLVKKSYLQAQGAI 920
                       |:...|:..::..:.:    |:..:.|...:.::|.|
Zfish  1025 -----------GQYSYDETLYSAKDTIKSFTLEVPVTKMQVMTSKGPI 1061

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ifNP_523378.2 Int_alpha 46..110 CDD:214549
Int_alpha 275..>316 CDD:214549 13/41 (32%)
Int_alpha 398..451 CDD:214549 20/52 (38%)
Int_alpha 466..>497 CDD:214549 10/30 (33%)
Integrin_alpha2 500..892 CDD:462478 84/457 (18%)
Glutenin_hmw <1121..1216 CDD:367362
itgae.2XP_003200076.2 vWFA 180..355 CDD:469594
Int_alpha 429..>465 CDD:214549 13/41 (32%)
Int_alpha 477..>517 CDD:214549 16/45 (36%)
Int_alpha 540..589 CDD:214549 18/51 (35%)
Integrin_alpha2 635..>850 CDD:462478 46/245 (19%)
Blue background indicates that the domain is not in the aligned region.

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