DRSC/TRiP Functional Genomics Resources

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Protein Alignment if and itga2b.2

DIOPT Version :10

Sequence 1:NP_523378.2 Gene:if / 32661 FlyBaseID:FBgn0001250 Length:1396 Species:Drosophila melanogaster
Sequence 2:XP_031750577.1 Gene:itga2b.2 / 100495138 XenbaseID:XB-GENE-5950162 Length:1034 Species:Xenopus tropicalis


Alignment Length:1423 Identity:335/1423 - (23%)
Similarity:531/1423 - (37%) Gaps:458/1423 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LILLLIAMSAHGYNIDLPSYVRFRQSSNSMFGFSIAMHKGRSGFYGN-QNNVSLIVGAPKFDTSR 83
            |:|||:..|.|..|:|....: ......|.||||:       .||.. .:.:|::||||:..|| 
 Frog     5 LLLLLLPTSVHNLNLDKNPQI-LSGPPGSYFGFSM-------DFYTTADHGMSIVVGAPRMQTS- 60

  Fly    84 YQQGVTEAGGVFKC--SLNDDDCKLVPFDSKGNNRNVDKEVVDR-------KSYQWLGATVATGR 139
             |..||..||||.|  ......|..:.||..|     |:.|:..       ||.||.||||.|. 
 Frog    61 -QINVTVGGGVFLCPWKPKGSSCTNIEFDGTG-----DRSVLFAGYTMKVFKSNQWFGATVRTW- 118

  Fly   140 DSDLVVACAPRYVFHTMTPSRAFRIDPVGTCFTSHNFEEFYEVSPCRTNNWGYHRQGS---CQAG 201
             ...:|||||...::.:.........|.|.|:.::|.::.||.:|||.:...::....   |:.|
 Frog   119 -DKAIVACAPFQQWNVIREGNESGTTPTGACYITNNLQDIYEFAPCRESKTVHNYVADKRFCELG 182

  Fly   202 FSAAINGNGSRLFIGAPGSW-YWQGQTYSIPPDAKFPFKPPLYQPFGTGGMASSHDVTRPENQVF 265
            |||.||.:|: |..|||  | |:.|                ||...|...:.:.|..:.|.....
 Frog   183 FSAEINKDGT-LLAGAP--WGYYLG----------------LYVTAGLPNILARHPSSAPMQSYH 228

  Fly   266 STSESASVND--DSYLGYSMVTGDFDGDRSEDVAIGMPR---GGNLVGRIVVNRWNMANIFNITG 325
            |...|..:..  |||.|:|:..|:|.||.:.::.:|.|:   .|.:....|.|.|.  |:.:..|
 Frog   229 SQQISPVIGSSYDSYKGFSVAYGEFTGDNTPEIILGSPKYQDKGIVEIYTVSNPWK--NLISFIG 291

  Fly   326 RQIGEYFGYSLATSDVDGDGLDDLLIGAPMYTDPDNVEGK-YDVGRVYILLQGGPTEEKRWTTEH 389
            :||..|||:|:|.:||:.||.||:|:|||::. .....|| .:.|:||:.||   ...:|::..|
 Frog   292 KQIASYFGHSVAATDVNNDGKDDVLVGAPLFM-VRRTGGKLQEFGQVYVYLQ---RNNRRFSFNH 352

  Fly   390 -IRDGYHSKGRFGLALTTLGDVNGDGYGDFAVGAPYDGPEGRGVVYIFHGSPMGPLAKPSQIIKS 453
             :..|....||||.::..|||::.||:.|.|||||:.|..|.|.|||:.||..|...:||||::|
 Frog   353 PVLTGSRVYGRFGSSIAPLGDIDQDGFNDVAVGAPFGGESGGGCVYIYRGSTAGLFPQPSQILES 417

  Fly   454 EQLVEGAPYPRTFGFALSGGLDMDGNTYPDLAVGAYSSDQVFIFKSRPVAAVNAETSFASNSKLI 518
            .     .|.|..|||||.||.|:|.|.||||.|||:.:|:||||:::||..:.|...|  :.:.:
 Frog   418 P-----LPPPTQFGFALRGGTDIDNNGYPDLLVGAFEADKVFIFRAQPVVVLQASLFF--HPEAL 475

  Fly   519 SLDDRSCQLVRDHKKVPCMLLTTCWSYTGRYLPEQLDFDVSWLLDAKKLLNPRMFFLRDEGKNIR 583
            :.|.:.|.|.::...|.|..:..|...:||.||:::.......||..|....|..|..|..:..:
 Frog   476 NPDVKLCNLPQNGAAVSCFTVRVCARASGRSLPKKISLSADLQLDRLKTRFARRTFFLDSSQPSK 540

  Fly   584 NQTIRLNYGQ-KYCLNETVYLL--DKVQDKLTPLEVEARYNLRSSRPLDPMVRHRRSILEPVIDQ 645
            ...:.|:... :.|.|.|.||.  .:.:|||:|:.:...::|..::.:|        .::|.:  
 Frog   541 TIDMELHSNSAQLCHNLTAYLRGESEFKDKLSPIAMSVNFSLTRAQSMD--------TVQPTL-- 595

  Fly   646 NREIVLRDAINIQKNCGPDNICEPDLKLKVS-TVDKYLFGSPEPLVIEVFISNTNEDAFEAAFYM 709
            :....|::..||..:||.||:|.|:|.|..: :.|..:.|....:.||...:|:.|.|:||..|:
 Frog   596 HGTTFLQEQTNILLDCGDDNVCIPNLHLTANWSADPLVIGVDNLVHIEFIATNSGEGAYEAELYV 660

  Fly   710 VTPPDLQFRKLQQLGEKKDTPITCSPPTPENNHTLKCDIGNPLESGKIAHFKISLVPEEKYGSSS 774
            ..||...:  :|.|||.:: .|.|||.....:..:.|::|||:::....|..:.|.......|.|
 Frog   661 WLPPGAHY--MQVLGEAEE-KILCSPKKGNESEVVVCELGNPMKNKAEIHADLQLSFSNLEDSGS 722

  Fly   775 SYDFYWEANSTNLEKPGSEYDNKIRQSVGIWVDTDLDIKGTSLPDYQLYKADDYKELENATKEDD 839
            :..|..:..|.|.....|   :.....:.:.|...|:::|:|.|...:....:::..|.:||..|
 Frog   723 TVTFQMQIKSRNTVNSTS---SVFLVEMAVKVTAFLELRGSSHPAEVVLPLPNWEPREESTKAQD 784

  Fly   840 IGPQVVHIYEIRNNRPSIIEEAEVFIHLPYETIVGDPLMYLLNQPETGGKIQCDDVAFNEYNLLL 904
            .|.:|.|:||:.|..|..: ..::.:..| ||..||..:|.|       :::.||          
 Frog   785 YGEEVTHVYELHNAGPGSV-HVQLVLQSP-ETYQGDYFLYPL-------RLEADD---------- 830

  Fly   905 DEKLVKKSYLQAQGAIWNSAQVSGQSSSSSSSGGASVHIEKARGEGFVRGVLVSNSTDAGDKLSP 969
                                                                             
 Frog   831 ----------------------------------------------------------------- 830

  Fly   970 KQVEQRRQEDTLEALGDASFVHRDRASQAVQEPQVNQTSFTTYSTSSSSSGSGAPSAQLRGHSTQ 1034
                                                                         ..|.
 Frog   831 -------------------------------------------------------------RMTC 834

  Fly  1035 GHIQMAGPVQHTSSSSSSNYRSWPAQQQQQHQQLLLAGSGGSGLGSPVTFNDKSQFGGRNNNFHT 1099
            |:..|..|:|                                                       
 Frog   835 GNQSMLNPLQ------------------------------------------------------- 844

  Fly  1100 GTLDLGTLNRGNVDNELYRSQGQYQNPSQSLGQSQGQFQANANQGHYQGQNQAQFQARNPGFQGQ 1164
              ||:.|                   |::                                    
 Frog   845 --LDILT-------------------PTE------------------------------------ 852

  Fly  1165 TSYQGQTQYSGQPGGYQTHHVTYSSGSKPYYGRENEDFYDEDNLQQATPGHWSSSSSSSSSSGTR 1229
                       :|..|                                          ||.||..
 Frog   853 -----------EPANY------------------------------------------SSRSGDH 864

  Fly  1230 RLRRSNDKDGATEKPLQIDLNSP---------------CQSARCKSIRCVVTNLGTEDGDAAFVA 1279
            ||.:...:...|::.::..:||.               |.|..|..:.|.:.||  |.|:.|.|.
 Frog   865 RLEKRELRRWDTDEGMEGGMNSTKKGEKTPRNHTVLLNCSSFLCWKVECSIQNL--ERGERATVK 927

  Fly  1280 IRARMVAKTMEK--------------LASNVPLNVSTL------AVANVTLLPFIGAPKDAIVKT 1324
            :.:.:...:..|              ..::||..:...      |.||.|:|             
 Frog   928 LHSILWVPSFLKRQQQQFILLSQGSFRVTSVPYKIQPAILLAGKATANTTVL------------- 979

  Fly  1325 HEIFYKAEPEPLQVPDVVPLWVVVLAACAGALIFLLLVWLLYKCGFFNRNRPTDHSQE 1382
                 .|.|:..:   .:|||.:::.|..|..:..|.|::::|.|||:|.||....||
 Frog   980 -----WASPDGQK---EIPLWWIIVGALGGLFLLALFVFVMWKLGFFHRTRPPSDDQE 1029

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ifNP_523378.2 Int_alpha 46..110 CDD:214549 23/66 (35%)
Int_alpha 275..>316 CDD:214549 14/45 (31%)
Int_alpha 398..451 CDD:214549 27/52 (52%)
Int_alpha 466..>497 CDD:214549 20/30 (67%)
Integrin_alpha2 500..892 CDD:462478 99/395 (25%)
Glutenin_hmw <1121..1216 CDD:367362 3/94 (3%)
itga2b.2XP_031750577.1 Int_alpha 30..88 CDD:214549 23/66 (35%)
FG-GAP_3 253..317 CDD:433275 24/65 (37%)
Int_alpha 294..345 CDD:214549 23/54 (43%)
Int_alpha 361..415 CDD:214549 27/53 (51%)
Int_alpha 421..>457 CDD:214549 22/35 (63%)
Integrin_alpha2 459..913 CDD:462478 124/781 (16%)

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