DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and Nepl18

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_651643.1 Gene:Nepl18 / 43410 FlyBaseID:FBgn0039611 Length:682 Species:Drosophila melanogaster


Alignment Length:810 Identity:158/810 - (19%)
Similarity:269/810 - (33%) Gaps:242/810 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LLIIILLLAFWPEV--------PFYLRAPLCLDKECVESSRQLLLWANTSK---------SPCHE 188
            :|.:.||:|..|.:        ||       .|....:.::::::.|..::         |||.:
  Fly     6 VLWLCLLVAIVPAMAKPSDAGDPF-------ADDLTSDYAKKIIVQAKVAEMKTMMKPEVSPCDD 63

  Fly   189 TYEWACGNF--------ASDYANHEYFVIKRGEWNYETYNEYQELNELNRFIAMLPNSQEGSVES 245
            .|..||||:        ..|.....:.:|.:|   ::     :.|..|.|     .|..:..:|.
  Fly    64 FYTHACGNWHRHNPAQLLGDVMTDNFKLISKG---FD-----RRLQRLLR-----ANDLQSELEK 115

  Fly   246 TVSSLYRSCRETDVLDKSQSDLLLKRAINAV---YG---------WQAFRDSNRLQSWEYKRVLV 298
            .:...|.||...     .:.|:..|.|:..|   ||         |    :|:....|   |.:.
  Fly   116 KMQRFYMSCNLV-----HRDDVHYKLALENVIREYGTLPALVGAQW----NSSDFSWW---RTVA 168

  Fly   299 VLQAKHGIFPYYRVTVENGFSNPHDYVIT-LDEGELGLPDKYFYGNDADEEVVRGYKLLLRDFAI 362
            .:|.|:|    .::.:  |....||...| ::...:..||               :|.:......
  Fly   169 QIQHKYG----KQIII--GLEIMHDIRNTSVNRVYISQPD---------------FKTINTRLTN 212

  Fly   363 NMGIVSREADLFADDIFHYERRIVNHIEDAKADANRPIN-------------KLMRLADLKIK-A 413
            .|..|....||  ...|.....:..|..:...:..|..:             .|..:|||:.| :
  Fly   213 LMEEVRTSMDL--QQYFGLSSSVAKHTAEQLTELERTFSSGGSGAATLQESLSLYTVADLQEKYS 275

  Fly   414 PSLPILESLQAI-----FPKTKITEDTEVLVRDPEVMHALSVLLSTSDKKPINNFIVWSLARKML 473
            ..|...|.|..|     .||:....|.|.|  |..::...|..|:|.     .|:::|.|....|
  Fly   276 DHLNFTEFLGLILGEENIPKSLYIYDEEYL--DKALLTMRSTPLATQ-----ANYVLWKLLEDFL 333

  Fly   474 -------------PHLSKEYRTLAETFDHALYGRTASYPRWLICSKVVRDWLPFAVDALQQQPPR 525
                         ....|.:..|||   ||:|.|   |....:.|:|.:.|              
  Fly   334 VDAQPKDMVKWCTESTKKYFGKLAE---HAVYKR---YRNPDVESEVHKIW-------------- 378

  Fly   526 QQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGI 590
                                :.:|.:|  .:..|.|.|:   |:..|.|....:||..|.|....
  Fly   379 --------------------DQIKGIF--RQRLLGDKLD---WISNATRTLAIEKLERMHLNINS 418

  Fly   591 PDEVLQQPTYLAQYYNELILNNVFFVEHLEWIWTFRRSQMEKKLG-PLAILDVIVSEMYTRDNPQ 654
            .||     ......|.|:.::.:.:|.:::.:...:..:...::. |...:|......:|.    
  Fly   419 YDE-----ENFENVYGEVFIDRLNYVSNVQQLLIAKGIRFVARINQPADSVDATELLGFTP---- 474

  Fly   655 AIAYSNKLNMLLVSKVLISSNYY-DYRYPVAVNFARIGTDILEALIDNFSTFLLQFNTQSTDISD 718
              ||:.:.|.:.:...|:...|: ..:||.|:.:|.:|..:...::..|.....|::..    .:
  Fly   475 --AYNIQENNITIPVALLQPRYFWGDQYPEALKYATLGYLLAHEMLHGFDDDGRQYDAS----GN 533

  Fly   719 AAP----EIRYA-QPDVNCLAAGQPPRLVHEL----NELSSNALKSFHVTLSAARTAARALSNFV 774
            .||    :.||. :....|..|     ..||.    ::|..:..:|.::..|.....|.|     
  Fly   534 LAPWWDLKSRYEFEERRKCFQA-----QYHEYQYGGSKLPESKDQSENIADSGGLKLAYA----- 588

  Fly   775 NAIDAGSAIQGSGIDQANTYEALGLTRRLRIPGLRSFNENELFTLSYMQQHC------------- 826
             |.:.....|...:.|..|.|.|            .||..:||.|.|.|..|             
  Fly   589 -AYELWLGQQSEEVLQRETMEGL------------PFNSRQLFFLGYAQLLCDDVQFLFQPWVSQ 640

  Fly   827 STTIADKDYARIKPLVESQLAE-SYLFNAT 855
            |...|...|..|.||  |...| .::||.:
  Fly   641 SDRHAPSKYRVIGPL--SNFQEFPWVFNCS 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 109/562 (19%)
Nepl18NP_651643.1 M13 58..679 CDD:341056 149/751 (20%)

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