DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment goe and Ece2

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_038944493.2 Gene:Ece2 / 408243 RGDID:1303039 Length:789 Species:Rattus norvegicus


Alignment Length:817 Identity:180/817 - (22%)
Similarity:333/817 - (40%) Gaps:162/817 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 PKDLEAARQDALNEVAAGGAGGRTPAAITPNSTHPSANGLRALLLPGRRSFDALMSLSRKR-RIL 129
            |..|.:....||.|:.:||:......|...:...|.      :.:.||...|:|...|:|| |.|
  Rat    72 PALLHSTMNVALQELGSGGSMVEYKRAKLQDEELPE------VTVEGRAIQDSLEVGSQKRTRQL 130

  Fly   130 Y--------VTTACLCALLLLIIILLLAFWPEVPFYLRAPL---CLDKECVESSRQLLLWANTSK 183
            :        |....:..|..|::..|:|.|.:   |.|.|:   |:.:.|:..:.::|...:...
  Rat   131 FGSHTQLELVLAGLILVLAALLLGCLVALWVQ---YHRDPVHSTCITEACIRVAGKILESLDRGV 192

  Fly   184 SPCHETYEWACGNFASDYANHEYFVIKRGEWNYETYNEYQELNELNRFIAMLPNSQEGS------ 242
            |||.:.|:::||.    :.........|..||  |:|...:.|:     |:|.:..|.|      
  Rat   193 SPCQDFYQFSCGG----WIRRNPLPSGRSRWN--TFNSLWDQNQ-----AILKHLLENSTFNSSS 246

  Fly   243 -VESTVSSLYRSCRETDVLDKSQSDLLLKRAINAVYGWQAFRDSNRLQSWEYKRVLVVLQAKHGI 306
             .|....|.|.||...:.::|..:. .|:..|:.:.||      |....|:....:.||:|..|.
  Rat   247 EAERKTRSFYLSCLHLERIEKLGAK-PLQDLIDKIGGW------NITGPWDEDNFMEVLKAVAGT 304

  Fly   307 F---PYYRVTVENGFSNPHDYVITLDEGELGLPDK-YFYGNDADEEVVRGYKLLLRDFAINMGIV 367
            :   |::.|.|.....:.:..:|.:|:..|.||.: |:....|:|:|:..|    .|:.:.:|::
  Rat   305 YRAAPFFTVYVGADSKSSNSNIIQVDQSGLFLPSRDYYLNRTANEKVLAAY----LDYMVELGML 365

  Fly   368 ------SREADLFADDIFHYERRI--VNHIEDAKADANRPINKLMRLADLKIKAPSLPILESLQA 424
                  |..|.:  ..:...|.::  :...:|.:.|..:..:| |.:::|:..|||:..||.|..
  Rat   366 LGGQPTSTRAQM--QQVLELEIQLATITVPQDQRRDEEKIYHK-MSISELQTLAPSMDWLEFLSF 427

  Fly   425 IFPKTKITEDTEVLVRDPEVMHALSVLLSTSDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDH 489
            :....::.:...|:|...|.:..:|.|::.::...:||:::|:|.:|....|.:.:.|..|....
  Rat   428 LLSPLELGDSEPVVVYGTEYLQQVSELINRTEPSILNNYLIWNLVQKTTSSLDQRFETAQEKLLE 492

  Fly   490 ALYG-RTASYPRWLICSKVVRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFF 553
            .||| :.:..|||..|.....|.|.||:.:|        |...|...:       ::|:.:.|..
  Rat   493 TLYGTKKSCTPRWQTCISNTDDALGFALGSL--------FVKATFDRQ-------SKEIAEGMIS 542

  Fly   554 SLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYLAQYYNELILNNVFFVEH 618
            .:|...:::||...|::...|...::|.:.:....|.||.:| :|..|...|:...::...|.::
  Rat   543 EIRAAFEETLENLVWMDEKTRLAAKEKADAIYDMIGFPDFIL-EPRELDDVYDGYEVSEDSFFQN 606

  Fly   619 LEWIWTFRRSQMEKKLGPLAILDVIVSEMYTRD----NPQAI--AYSNKLNMLLVSKVLISSNYY 677
            :..::.|....|..:|          .:..:||    .||.:  .|....|.::....::.:.:|
  Rat   607 MLNLYNFSAKVMADQL----------RKPPSRDQWSMTPQTVNAYYLPTKNEIVFPAGILQAPFY 661

  Fly   678 DYRYPVAVNFARIGT----DILEALID----------------NFSTFLLQFNTQSTDISDAAPE 722
            .:.:|.|:||..||.    ::..|..|                |.|....|.:|       |..|
  Rat   662 AHNHPKALNFGGIGVVMGHELTHAFDDQGREYDQEGNLRPWWQNESLTAFQNHT-------ACME 719

  Fly   723 IRYAQPDVNCLAAGQPPRLVHELNE-LSSNALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGS 786
            .:|.|..||    |:....:..|.| ::.|.      .|.||..|.:|.            ::..
  Rat   720 EQYNQYQVN----GERLNGLQTLGENIADNG------GLKAAYNAYKAW------------LRKH 762

  Fly   787 GIDQANTYEALGLTRRLRIPGLRSFNENELFTLSYMQ 823
            |.:|  ...|:|||            .::||.:.:.|
  Rat   763 GEEQ--PLPAVGLT------------NHQLFFVGFAQ 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 119/533 (22%)
Ece2XP_038944493.2 None

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