DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and Nep2

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001246914.1 Gene:Nep2 / 40588 FlyBaseID:FBgn0027570 Length:774 Species:Drosophila melanogaster


Alignment Length:741 Identity:157/741 - (21%)
Similarity:271/741 - (36%) Gaps:178/741 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 LCLDKECVESSRQLLLWANTSKSPCHETYEWACG------NFASDYANHEYFVI---KRGEWNYE 217
            :||.:||:.::..:|........||...||:|||      |...|..:...|.:   |..|...:
  Fly    83 VCLTQECIHTASTVLRKMKPEVEPCDNFYEFACGTYLEEENIPDDKVSISTFSVISDKLQEQLKD 147

  Fly   218 TYNEYQELNELNRFIAMLPNSQEGSVESTVSSLYRSCRETDVLDKSQSDLL----LKRAINAVYG 278
            .....:...|...|  .|||           .||::|     ::|:..:.|    :.|....:.|
  Fly   148 IITAERPETEPKHF--RLPN-----------LLYKAC-----MNKTLIETLGPEPITRVAERLGG 194

  Fly   279 WQAFR-DS-NRLQSWEYKRVLVVLQAKHGIFPYYRVTVENGFSNPHDYV---------------- 325
            |...: || |...||.::.     |.|.     :|..   |||  .||:                
  Fly   195 WPLIKGDSWNADDSWTWQE-----QVKK-----FRTA---GFS--MDYIIDFSIGVDLQNSTKRL 244

  Fly   326 ITLDEGELGLPDKYFYGNDADEEVVRGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNHIE 390
            |.||:..|.|..:|.. ...:|.:|..|...:.|.|:..| .:|       |:...|..:....|
  Fly   245 IDLDQSSLALSREYLV-KGFNETLVTAYYKYMVDIAVLFG-ANR-------DLAKTELLLSLEFE 300

  Fly   391 DAKADANRPINK---------LMRLADLKIKAPSLPILESLQAIFPK-TKITEDTEVLVRDPEVM 445
            .|.|:.:.|..|         |...|.|:...|.:..::.:.|:.|: ..:.||..:.:..|...
  Fly   301 MALANISWPNEKRRNSSELYNLRTPAQLQAAYPYVQWVDYMNALLPEGLNVAEDEMINLSVPSFF 365

  Fly   446 HALSVLLSTSDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDHALYGRTASYPRWLICSKVVR- 509
            ..|..||:.:.|:.|.|::.|.:....:..||:|:|.....:..||.||.....||..|..:.. 
  Fly   366 EDLGKLLAKTPKRVIANYMFWRIHGFSVGFLSEEFRKRQLQYATALSGRQEQEARWKECVDIATS 430

  Fly   510 ----------DWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLE 564
                      |.|..:|.:|.   ..:.|. ..||:..|.           |...:||...|.|:
  Fly   431 SMDEVCEDDFDSLGISVGSLY---VGKHFH-KDSKANALE-----------MVNEIRNVFNDILD 480

  Fly   565 QAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYLAQYYNELILN-----------NVFFVEH 618
            :..|::...::..:.||:.|....|.|||:|.... ||.||.:|.::           |:|..: 
  Fly   481 EVNWMDAKTKKEAKLKLHSMATHIGYPDEMLDNEK-LAAYYAKLDIDPDKYFESFLGMNIFGTD- 543

  Fly   619 LEWIWTFRRSQMEKKLGPLAILDVIVSEMYTRDNPQAIA---YSNKLNMLLVSKVLISSNYYDYR 680
                ::|.:.::     |:...|      :.|....||.   ||:..|.:.....::..::::.:
  Fly   544 ----YSFNKLRL-----PVNKTD------WVRHARPAIVNAFYSSLENSIQFPAGILQGHFFNAQ 593

  Fly   681 YPVAVNFARIGTDILEALIDNFSTFLLQFNTQSTDISDAAPEIRYAQPDVNCLAAGQPPRLVHEL 745
            .|..:||..||..|...:...|.....||:.:. ::.|      :..||.......:...::.:.
  Fly   594 RPKYMNFGAIGYVIGHEITHGFDDQGRQFDVKG-NLRD------WWHPDTQKAYLAKAKCIIEQY 651

  Fly   746 NELSSNALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGI-DQANTYEALGLTRR------- 802
            ...:.                 ||....:|.|:.    ||..| |.....|:....||       
  Fly   652 GNYTE-----------------RATGLNLNGINT----QGENIADNGGVKESYIAYRRWAEKHGP 695

  Fly   803 -LRIPGLRSFNENELFTLSYMQQHCS 827
             .::||| .:...::|.::..|..|:
  Fly   696 EAKLPGL-DYTPEQMFWVAAGQTWCA 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 127/573 (22%)
Nep2NP_001246914.1 M13 104..772 CDD:341056 152/720 (21%)

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