DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment goe and Nepl4

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster


Alignment Length:674 Identity:126/674 - (18%)
Similarity:241/674 - (35%) Gaps:205/674 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 ECVESSRQ-----LLLWANTSKSPCHETYEWACGNFASDYANH-EYFVIKRGEWNYETYNEYQEL 225
            ||..:..|     |:.:.::.|:||.:.|.:|||.:.:.:.:| ...:|...:.|    .:|::|
  Fly    37 ECNSTINQQHIDTLMSYVDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQIN----RQYEDL 97

  Fly   226 NELNRFIAML--PNSQEGS--VESTVSSLYRSC---------RETDVLDKSQSDLLLKRAINAVY 277
                 |:.:|  |::.|..  :.:.|.:.|:||         |..::||:   |||..       
  Fly    98 -----FLQLLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDLRRYIELLDR---DLLAS------- 147

  Fly   278 GWQAFRDSNRLQSWEYKRVLVVLQAKHGIFPYYRVTVENGFSNPHDYVITLDEGELGLPDKYFYG 342
                      |.|..:..:|..| .::|...:| |.||..:.|...::|.|      ||......
  Fly   148 ----------LNSTHWMHLLAAL-GRYGYHGHY-VQVEVRWYNATHHMIFL------LPHNRHLN 194

  Fly   343 NDADEEVVRGYKLLLRD--------------FAINMGIVSREADLFADDIF-HYERRIVN----- 387
            ....:::   |..|.:|              .::...:|.......|||.| :|....:.     
  Fly   195 LSLTQDI---YDALSQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSADDTFRNYSLDQIRTEVPG 256

  Fly   388 -HIEDA-KADANR--PINKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVMHAL 448
             |.::| :....|  |.|.:.::.|          |::::.:..... |.||.:|.|     ::|
  Fly   257 LHWDEALRTQLGRSVPGNHVFQVDD----------LDAIEGLVEYLN-TVDTLLLNR-----YSL 305

  Fly   449 SVLLSTSDKKPINNFIVW-----SLARKMLPHLSKE-YRTLAETFDHALYGRTASYPRWLICSKV 507
            :..||...:.|.|....|     |..|..:.|:.:. |..:...::.:.|.|             
  Fly   306 ARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFYSR------------- 357

  Fly   508 VRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLEQAKW-LEP 571
                                            :...:|.::..:|..|::||:..::...: |..
  Fly   358 --------------------------------RRHADELVIHSVFQQLQSQLELRVQHNAFNLSQ 390

  Fly   572 AARQFIQKKLNEMRLQFG-IPDEVLQQPTYLAQYYNELILNNVFFVEHLEWIWTFRRSQMEKKLG 635
            ...:.:|.|:::||:..| :|..|.:|                 |....:..|:..|...|..|.
  Fly   391 DLVKSLQAKVHQMRINVGNLPPNVTEQ-----------------FYWDSDRRWSVGRDFYENHLN 438

  Fly   636 PLAILDVIVSE-----------------MYT---RDNPQAIAYSNKL-NMLLVSKVLISSNYYDY 679
            .|.....:|::                 |:|   .||..|..|...| |::.|....:...::|.
  Fly   439 SLLYYYTLVADLESSSDQEERDIWYSFNMHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPFFDA 503

  Fly   680 RYPVAVNFARIGTDILEALIDNFSTFLLQFNTQST--DISDAAPEIRYAQPDVNCLAAGQPPRLV 742
            .:..|:.:..:...:...::..|.|.|:.::.|..  :.||...|:......|.||.:.     .
  Fly   504 NFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNLRNFSDQLGEVELYNGAVGCLNSS-----A 563

  Fly   743 HELNELSSNALKSFHVTLSAARTA 766
            ..|||.:|:        :|.:|.|
  Fly   564 VMLNERTSD--------VSGSRLA 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 104/574 (18%)
Nepl4NP_609019.1 GluZincin 59..649 CDD:472708 121/652 (19%)

Return to query results.
Submit another query.