DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and Nep6

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_572831.2 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster


Alignment Length:527 Identity:107/527 - (20%)
Similarity:203/527 - (38%) Gaps:109/527 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LLLLIIILLLAFWPEVPFYLRAPLCLDKECVESSRQLLLWANTSKSPCHETYEWACGNFASDYAN 203
            |::::.::||            .|...::|   .:||....:....||...:::||||:   |:|
  Fly    11 LVVILGVMLL------------KLAAAQDC---QQQLDNDTDAEVKPCENFHQYACGNW---YSN 57

  Fly   204 HEYFVI----KRGEW----NYETYNEYQELNELNRFIAMLPNSQEGSVESTVSSLYRSC------ 254
            ....::    .|.:|    ..:.....:|.:..:.|.|   |:...:..:.:.:|||.|      
  Fly    58 TSQRILGAHDMRSKWVANLKLQLIRYLEESSSTDSFSA---NTSVTTSTAQLGTLYRCCLLSGQS 119

  Fly   255 --RETDVLDKSQSDL-LLKRAINAVYGWQAFRDSNRLQSWEYKRVLVVLQAKHGIFPYYRVTVEN 316
              ..||.|.:|.::. ||.......:.|.....:.|               .:|....:|:.|::
  Fly   120 IRTYTDALSRSGANFPLLANHTGGSFDWVLANAALR---------------TYGAQGLWRLLVKD 169

  Fly   317 GFSNPHDYVITLDEGELGLPDKY-FYGNDADEEVVRGYKLLLRDFAINMGIVSREADLFADDIFH 380
            .:.:....:..:      ||.|: ..|.| ||.....|:..|:...:.:|:..|.|.|.|:.:..
  Fly   170 NWQSADQRIFYM------LPPKFDLLGRD-DELNEFLYQRYLKILLLELGLRVRRAALLAEKLVA 227

  Fly   381 YERRIVNHIEDAKADANRPINKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVM 445
            :|:.:...:.: .|:....:.|...|.||:.:.|.|.:....:.|.........|.:||.|.:.:
  Fly   228 FEKSLQKLLPN-DAEQTLVLRKPQSLKDLESQLPRLELKRYFETILEGIDWDSKTLLLVADLDYL 291

  Fly   446 HALSVLLS--TSDKKPINNFIVWSLAR--KMLPH----LSKEYRTLAETFDHALYGRTASYPRWL 502
            ..|..||:  |||...::.:::..|..  ::..|    |..:.....|.....:.|:.......|
  Fly   292 QGLQRLLAEHTSDPMVLSTWLLLQLPAYFELRLHDDDKLGNQRNHCLEQLRKLMPGQLGRLQMQL 356

  Fly   503 ICSKVVRDWLPFAVD--ALQQQPPRQQFETMTSKSRGLNKTQ-GNEELLKLMFFSLRNQLKDSLE 564
            :..:..:|....|:.  |:..:..:||||.:      ||:|: .||:|:      .||..:|.|.
  Fly   357 VLGESYQDVYDTAIQQIAVLFRDLKQQFELV------LNETEVFNEDLV------TRNLARDKLR 409

  Fly   565 QAKWLEPAAR------------------QFIQKKLNEMRLQ----FGIP-DEVLQQPTYLAQYYN 606
            ..:.|.|..:                  ..:|..|::.:|:    ||.| ..|...|..:..|| 
  Fly   410 AMRLLTPRLQDPINGGPGTPQLGGNCDANLLQLSLSQAKLEYRQVFGEPVTSVPADPLSVNAYY- 473

  Fly   607 ELILNNV 613
            .|.||.:
  Fly   474 RLKLNRI 480

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 100/482 (21%)
Nep6NP_572831.2 M13 40..653 CDD:341056 100/483 (21%)

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