DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment goe and Phex

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_035207.1 Gene:Phex / 18675 MGIID:107489 Length:749 Species:Mus musculus


Alignment Length:796 Identity:158/796 - (19%)
Similarity:303/796 - (38%) Gaps:152/796 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 TACLCALLLLIIILLLAFWPEVPFYLRAPLCLDKECVESSRQLLLWANTSKSPCHETYEWACGNF 197
            |..|..||.|:...||:|..:..:      ||..||:|::..::...|.|..||...:.:||..:
Mouse    30 TLVLGTLLFLVSQGLLSFQAKQEY------CLKPECIEAAAAIMSKVNLSVDPCENFFRFACDGW 88

  Fly   198 ASDYANHEYFVIKRGEWNYETYNEYQEL--NELNRFIAMLPNS----QEGSVESTVSSLYRSCRE 256
            .|:....|         :..:|..|..|  |...:..|:|..|    ::.........||.||..
Mouse    89 ISNNPIPE---------DMPSYGVYPWLRHNVDLKLKALLEKSVSRRRDTEAVQKAKILYSSCMN 144

  Fly   257 TDVLDKSQSDLLLKRAINAVYGWQAFRDSNRLQS-WEYKR--VLVVL-----QAKHGIFPYYRVT 313
            ...::|:.:..||....::.:.|.....:...:. |..::  :|..|     |..:.:|....|:
Mouse   145 EKAIEKADAKPLLHILRHSPFRWPVLEANIGPEGVWSERKFSLLQTLATFRGQYSNSVFIRLYVS 209

  Fly   314 VENGFSNPHDYVITLDEGELGLPDKY-FYGNDADEEVVRG--YKLLLRDFAINMGIVSREADLFA 375
            .::..||.|  ::.||:..|.|..:. |..|..:.:..|.  ||.:: |.|:.:|..|..|:...
Mouse   210 PDDKASNEH--ILKLDQATLSLAVREDFLDNTTEAKSYRDALYKFMV-DTAVLLGANSSRAEHDM 271

  Fly   376 DDIFHYERRIVNHIEDAKADANRPINKLMRLADLKIKAPSLPILESLQAI-----FPKTK-ITED 434
            ..:...|.:|...:...:...:..:...|.:::|....|....|..::.:     :|..| |...
Mouse   272 KSVLRLEIKIAEIMIPHENRTSEAMYNKMNISELSAMIPQFDWLGYIKKVIDTRLYPHLKDIGPS 336

  Fly   435 TEVLVRDPEVMHALSVLLSTSDKKPINNFIVWSLARKMLPHLSK--EYRTLAETFDHALYGRTAS 497
            ..|:||.|:....|..:|....||.|.|::||.:....:|:||:  :||.|  .|...:.|.|..
Mouse   337 ENVVVRVPQYFKDLFRILGAERKKTIANYLVWRMVYSRIPNLSRRFQYRWL--EFSRVIQGTTTL 399

  Fly   498 YPRWLICSKVVRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDS 562
            .|:|..|...:...||:.|..:......|:           :|.:..|||::    .:|....|.
Mouse   400 LPQWDKCVNFIESALPYVVGKMFVNVHFQE-----------DKKEMMEELIE----GVRWAFIDM 449

  Fly   563 LE-QAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYL-----------AQYYNELILNNVFF 615
            || :.:|::...::..|:|...:..:.|.| |.:...||:           :.|:..::....:.
Mouse   450 LEKENEWMDAGTKRKAQEKARAVLAKVGYP-EFIMNDTYVNEDLKAIKFSESDYFGNVLQTRKYL 513

  Fly   616 VEHLEWIWTFRRSQMEKKLGPLAILDVIVSEMYTRDNPQAI--AYSNKLNML-LVSKVLISSNYY 677
            .:. ::.|.  |..:.|            :|.:|  ||..:  .||...|.: ..:..|....::
Mouse   514 AQS-DFFWL--RKAVPK------------TEWFT--NPTTVNAFYSASTNQIRFPAGELQKPFFW 561

  Fly   678 DYRYPVAVNFARIGTDILEALIDNFSTFLLQFNTQSTDIS-------DAAPEIRYAQPDVNCLAA 735
            ...||.::::..||..:.......|..     |.:..|.:       ....|.::.: ...|:  
Mouse   562 GTEYPRSLSYGAIGVIVGHEFTHGFDN-----NGRKYDKNGNLDPWWSVESEEKFKE-KTKCM-- 618

  Fly   736 GQPPRLVHELNELSSNALKSFHVTLSAART-------------AARALSNFVNAIDAGSAIQGSG 787
                     :|:.|:...|...:.:...||             |.||...::|.       :..|
Mouse   619 ---------INQYSNYYWKKAGLNVKGKRTLGENIADNGGLREAFRAYRKWIND-------RRQG 667

  Fly   788 IDQANTYEALGLTRRLRIPGLRSFNENELFTLSYMQQHCSTTIADKDYARIKPLVESQLAESYLF 852
            :::.            .:||: :|..|:||.|||....|::  ...:.||.:..:.:.....:..
Mouse   668 VEEP------------LLPGI-TFTNNQLFFLSYAHVRCNS--YRPEAAREQVQIGAHSPPQFRV 717

  Fly   853 NATWQHIQFLPRSTNC 868
            |....:.:...::.||
Mouse   718 NGAISNFEEFQKAFNC 733

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 112/547 (20%)
PhexNP_035207.1 M13 74..740 CDD:341056 143/746 (19%)

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