DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and nep-22

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_509528.1 Gene:nep-22 / 181144 WormBaseID:WBGene00020788 Length:798 Species:Caenorhabditis elegans


Alignment Length:751 Identity:136/751 - (18%)
Similarity:256/751 - (34%) Gaps:176/751 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ESSRQLLLWANTSKSPCHETYEWACGNFASDYANHEYFVIKRGEWNYETYNEYQELNELNRFIAM 234
            :::..||...:.:..||.:.|.:.|..|..:..     :.|.|.....||::.| ::..:..:|.
 Worm    70 QAANYLLNGLDDTVDPCQDFYAFTCNKFLQNTD-----LQKLGRSRLGTYDQAQ-VDVYSEIVAA 128

  Fly   235 L-----PNSQEGSVESTVSSLYRSCRETDVLDKSQSDLLLKRAINAVYGWQAFRDSNRLQSWEYK 294
            |     .::.....|....:.:.:|: .::...:....::...|.:::|...|.......:.:|.
 Worm   129 LSKIDVTSTTTSKTERITKAAFETCK-NNLASPADKTAVVYAEITSLFGGVPFFGEPLKTNVDYW 192

  Fly   295 RVLVVLQAKH--GIFPY------YRVTVEN-------GFSNPHD------YVITLDEGELGLPD- 337
            .|...::.||  |...|      |:...:|       |.|...|      |:..:::....:.| 
 Worm   193 MVAGQIEQKHAVGTLTYTIASSDYKDHTKNALYTGPPGLSLARDFYVKPQYIAEVNQRVSDVNDL 257

  Fly   338 --------KYFYGND----ADEEVVRGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNHIE 390
                    |...|.|    |.:|||        :|.:.:.:.|     :.||:....::..|...
 Worm   258 LTAFANAAKKNVGADALLAAAQEVV--------NFEVQIAMAS-----WPDDLLRNYQQQYNPYN 309

  Fly   391 DAKA-DANRPINKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVMHALSVLLST 454
            .|.| .|.|.||....|..|.....|    ::.||.:         .::|.:|.....|:   |.
 Worm   310 IASATTAYRAINWKSYLGQLFHGVAS----DADQANY---------NIVVTEPSYFAWLN---SV 358

  Fly   455 SDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDH-----ALYGRTASYPRWLI----------- 503
            .|.|..|:.:|   |..|:..|      ||:..|.     |......:|..:.:           
 Worm   359 FDGKTSNSTVV---ANYMIAQL------LADESDFINPATAKVSSDTNYIHYALRNGRGIKKIGK 414

  Fly   504 --------------CSKVVRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFFS 554
                          |..::..::|:...          :..:.|||. .||.|.:   :|.....
 Worm   415 REYRMADLDGISEGCMDLLTAYMPYGTG----------YVYVKSKSE-RNKVQAD---VKDQTTL 465

  Fly   555 LRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYLAQYYNELILNNVFFVEHL 619
            :.|..:..::...|::..::.....|.:.:...||.|:.:...       :|:....:.:..::.
 Worm   466 IINNFQGMIDSLNWMDTFSKNRAHNKSDSLVKNFGWPEAMFGD-------FNDFTTVDAYNQDYA 523

  Fly   620 EWIWTFRRSQMEKKLGPLAILDV---------IVSEMYTRDN----PQAIA--YSNKLNMLLVSK 669
            ..|..:.:.:.: ..|..|:|..         |:.|...|.|    |..:.  |..:.|.:....
 Worm   524 SIIDLYTKDKND-IYGIFAVLKKGMEVREFFRIMGEPADRTNFLQSPAMVNAWYQPERNSITFPY 587

  Fly   670 VLISSNYYDYRYPVAVNFARIGTDILEALIDNFSTFLLQ--FNTQSTDISDAAPEIRYAQPDVNC 732
            ...:..||:..||.|.|||..|......|...:....:|  ||.:.||.|    ..:....|.|.
 Worm   588 AAWNPPYYNLNYPQAYNFAGQGGTGGHELTHGYDDEGVQFGFNGELTDCS----WNKCGWMDTNS 648

  Fly   733 LAAGQPPRLVHELNELSSNALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGIDQA--NTYE 795
            .:.         ..:::...:..|.......:|.....:|  .|...|..|...|..||  .:|.
 Worm   649 SSG---------FIDMAQCVVTQFSTQCCPEKTGNIHCAN--GATTQGENIADLGGQQAAYRSYR 702

  Fly   796 ALGLTRRL-----RIPGLRSFNENELFTLSYMQQHC 826
            ....|.|.     |:|||.::..|::|.::|....|
 Worm   703 QYVATTRKGVEEDRLPGLENYTPNQIFWITYGYSWC 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 104/592 (18%)
nep-22NP_509528.1 M13 83..793 CDD:341056 134/738 (18%)

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