DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and nep-23

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_503004.2 Gene:nep-23 / 178472 WormBaseID:WBGene00013785 Length:714 Species:Caenorhabditis elegans


Alignment Length:855 Identity:169/855 - (19%)
Similarity:279/855 - (32%) Gaps:262/855 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 MSLSRKRRILYVTTACLCALLLLIIILLLAFWPEV------------------------------ 154
            |:|.:.:..|    :||...:||:|:::..|...|                              
 Worm     1 MNLKKVKEKL----SCLSTNILLLIVVIAIFGTVVIWKIDKLELWEAEALSSQESMLGELKVAVT 61

  Fly   155 ------PFYLRAPLCLDKECVESSRQLLLWANTSKSPCHETYEWACGNFASDYANHEYF------ 207
                  |.:|:..:|...||:..:.||..:.:.|..||...|:..||.      .||:.      
 Worm    62 SLEQHRPGHLKKNVCQTPECITLAHQLHNYHDPSADPCDNFYQSVCGK------QHEHSLKSGLA 120

  Fly   208 --------VIKRGEWNYETYNEYQELNELNRFIAMLPNSQEGSVESTVSSLYRSCRETDVLDKSQ 264
                    :|:....|.:.....:..||:.:|            ....|...|:...:|:..::.
 Worm   121 KKHLILRNLIRETITNRKVTPTSKSENEMRKF------------HGICSKYQRANSSSDIAQQAL 173

  Fly   265 SDLLLKRAINAVYGWQAFRDSNRLQSW---------------EYKRVLVVL-QAKHGIFPY---Y 310
            .|:              |||...:.||               |....||.| |...|:|..   |
 Worm   174 RDI--------------FRDVQSIGSWPAGSRNWNESDFNLNEMLNNLVKLGQRNFGLFQISFKY 224

  Fly   311 R----VTVE---NGFSNPHDYVITLDEGELGLPDKYFYGNDADEEVVRGYKLLLRDFAINMGIVS 368
            |    ::.|   ..:|.....::.:.|....:||:.               .||:|..   |..|
 Worm   225 RDQLLISAEEHRRNYSKLEPTILNIFETNGLVPDRI---------------QLLKDLE---GFAS 271

  Fly   369 READLFADDIFHYERRIVNHIEDAKADANRPINKLMRLADLKIKAPSLPILESLQ-AIFPKTKIT 432
            .||.|..    ||....::.::.|..|...|....|.|    :||...|..|.|. .|..||.:.
 Worm   272 LEALLKN----HYYLDNMDKMKPAVLDDLVPSVDFMGL----VKAMISPGKEHLMPKIELKTSVL 328

  Fly   433 EDTEVLVRDPEVMHALSVLLSTSDKKPINNFIVWSLARKMLPHLSKEYRTLAETFDHALYGRTAS 497
            ..|  |..| |.|:..:::|.| .|:.:.|:::::.....|.||  .:.|.::.      |.|  
 Worm   329 NQT--LFND-ENMNLEAIILDT-PKRTLANYLIFNFIDSSLDHL--VFETTSQK------GNT-- 379

  Fly   498 YPRWLICSKVVRDWLPFA---------VDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFF 553
                  |...|..:||.|         ||                        :.|.:|:..:..
 Worm   380 ------CEDKVITYLPRASLRVFIRNYVD------------------------KENRDLITQLAE 414

  Fly   554 SLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRLQFGIPDEVLQQPTYL------------AQYYN 606
            ..|..|...::.:.||:..::|....|:|.|....|.|| ..:.|..|            ..||.
 Worm   415 KTRIALHTLVQNSTWLKAESKQLALDKINAMGKMIGYPD-FFEPPGTLDGMFKNLNLDSSDTYYT 478

  Fly   607 ELILNNVFFVEH-LEWIWTFRRSQMEKKLGPLAILDVIVSEMYTRDNPQAIAYSNKLNMLLVSKV 670
            .|.....:|||. :::.      ..|..|.|    |:.|.||    |.......|:||.|   ..
 Worm   479 ALNKLERYFVEQKMDYF------AEETPLDP----DLRVFEM----NAYYYIPGNQLNFL---AP 526

  Fly   671 LISSNYYDYRYPVAVNFARIGTDILEALIDNFSTFLLQFNTQSTDISDAAPEIRYAQPDVNCLAA 735
            ......:|..||..||.|..|..|...:...|....:....:..::.....|:...:....||| 
 Worm   527 FFDDPMFDSTYPDYVNIAMSGNIIGHEMGHAFGPHAILRTVRGREVWMKPEELAEYESRAQCLA- 590

  Fly   736 GQPPRLVHELNELSSNALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGIDQA------NTY 794
                   ::.:|...                    .:|....|.|..|.....|..      ..:
 Worm   591 -------NQYSEYDD--------------------PDFGRVFDGGKVIDELVADNIGREVSWKMF 628

  Fly   795 EALGLTRRLRIPGLRSFNENELFTLSYMQQHCSTTIADKDYARIKPLVE-SQLAESYLFNATWQH 858
            ::|.||...||.|...::.::|:.......|| |..|.:|   :|..:| |...:::..|..:.:
 Worm   629 KSLDLTNATRIIGFEDYDIDQLYFRVGALTHC-TPHAMRD---LKGSIESSHPRKAFRVNGVYAN 689

  Fly   859 IQFLPRSTNC 868
            :....|:.||
 Worm   690 LPEFARAFNC 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 119/570 (21%)
nep-23NP_503004.2 M13 96..711 CDD:341056 151/756 (20%)

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