DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and nep-16

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001023203.2 Gene:nep-16 / 177541 WormBaseID:WBGene00018472 Length:868 Species:Caenorhabditis elegans


Alignment Length:817 Identity:146/817 - (17%)
Similarity:279/817 - (34%) Gaps:246/817 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 RRILYVTT----------------ACLCALLLLIIILLLAFWPEVPFYLR------APLCLDKEC 168
            |||::..|                ..||||..|:.|.|...|.......|      ..:|..::|
 Worm   175 RRIIFPITPFYRRKGTCSKCSIWLGALCALFFLLSIALFLVWVITTDGFRTIGAKSTNVCNTRQC 239

  Fly   169 VESSRQLLLWANTSKSPCHETYEWACGNFASDYANHEYFVIKRGEWNYETYNEYQELNELNRFIA 233
            ::.:.:|....:....||...|.::|..:.|..|:.:...:  .:...|:......|........
 Worm   240 IDIAFRLSSCIDDEIEPCENFYRYSCQRYHSQTADKQMSFL--SQLKDESLRRMHSLLSSEEDSR 302

  Fly   234 MLPNSQEGSVESTVSSLYRSCRETDVLDKSQ--SDL-----------LLKRAIN---AVYGWQAF 282
            :||.|...|     .|||.:|... ||..|.  :||           ||:...|   ..|.|:  
 Worm   303 LLPKSARLS-----RSLYSACMNA-VLRSSNAPTDLLTFIRNFPCGPLLRDCQNFHADSYSWE-- 359

  Fly   283 RDSNRLQSW---EYKRVL------------VVLQAKH-------GIFPYYRVTVENGFSNPHDYV 325
            |.:..| .|   .|..::            ::||.|.       |:..  |..::....:|.::.
 Worm   360 RHAGML-DWYAGRYNLIVYDRDVHPQDRSKIILQIKPPDLTPIVGLIE--RDLIDLARPSPTEFE 421

  Fly   326 ITLDEGELGLPDKYF--YGNDADEEVVRGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNH 388
            ..|   :|.|.....  :..|:          ||||        .|:.....|::   .|.:|:.
 Worm   422 PLL---QLSLRQNLLSAFARDS----------LLRD--------PRDVQSQLDEV---ARLMVDL 462

  Fly   389 IEDAKADAN-RPINKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVL-VRDPEVMHALSVL 451
            ...|:..|: .|....|.:.::....|.|.:.|.|.|....|....:|::| ::|.:....||.:
 Worm   463 YISARQSASLTPNTTYMTIGEMFQALPQLYLREFLDAQLSNTYRWTETDMLSIQDYDYFARLSDI 527

  Fly   452 LSTSDKKPINNFI----VWSLARKMLPHLSKEYRTLAETFDHALYGRTASY-PR----WLICSKV 507
            ::.:.::.:.|::    ||:|         |:|                || ||    |..|   
 Worm   528 MAQTSRQAVANYLLTVTVWNL---------KQY----------------SYSPRDQYGWREC--- 564

  Fly   508 VRDWLPFAVDALQQ-QPPRQQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLEQAKWLEP 571
                    ||.:.. :..|:.:....|::..|.|.|...:.||:.|.|:...             
 Worm   565 --------VDQISSFEIGRKMYVDKASQTIDLPKIQEFLQNLKIDFLSVHRS------------- 608

  Fly   572 AARQFIQKKLNEMRLQFGIP-----DEVLQQPTYLAQYYNELILNNVFFVEHLEWIWTFRRSQME 631
            ...|:: ..:|.:....|.|     :|::.:|.      :::.||...:.:.:..:....|....
 Worm   609 TPLQYL-SNINRLGFYVGFPRRLQNEELIWKPV------SQVSLNETDYFDSMIRVGKAERDYTM 666

  Fly   632 KKLGPLAILDVIVSEMYTRDNPQAIAYSNKLNMLLVSKVLISSNYY--DYRYPVAVNFARIGTDI 694
            .::|  ..||...:..:...:| .:.|::.:..:::....|....|  ....|:...::.:|...
 Worm   667 SQIG--TYLDNDDTTTFPISDP-TMLYNSNVGAIVIPLAFIEPPIYLPGDEVPMYGIYSSLGITT 728

  Fly   695 LEAL----------------IDNFSTFLLQFNTQ-----------STDISDAAPEIRYAQPDVNC 732
            |:.:                :||.....|..|.|           :.:::||.....|:      
 Worm   729 LQMISKVFWQGLDKTSQLECLDNVFRGFLDANRQRSPNIEPELLATIELADAFKSALYS------ 787

  Fly   733 LAAGQPPRLVHELNEL----SSNALKSFHVTLSAARTAARALSNFVNAIDAGSAIQGSGIDQANT 793
            .|..|....:|....|    |:::::|..:|.|.                  ....|.|.:..:.
 Worm   788 YAKWQNDHHIHHEKTLPAFDSTDSMRSLMLTFST------------------MFCSGEGSEPGSD 834

  Fly   794 YEALGLTRRLRIPGLRSFNEN-ELFTLSYMQQHCSTT 829
            |||:          :.:..|| .:|::.:   :|:.:
 Worm   835 YEAM----------INTVAENSRMFSIHF---NCNNS 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 103/566 (18%)
nep-16NP_001023203.2 GluZincin 254..>725 CDD:472708 103/566 (18%)

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