DRSC/TRiP Functional Genomics Resources

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Protein Alignment goe and nep-10

DIOPT Version :10

Sequence 1:NP_573160.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_494532.2 Gene:nep-10 / 173684 WormBaseID:WBGene00017555 Length:711 Species:Caenorhabditis elegans


Alignment Length:634 Identity:133/634 - (20%)
Similarity:231/634 - (36%) Gaps:186/634 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 LLLLIIILLL-------------AFWPEVPFYLRAP-------------------LCLDKECVES 171
            |||||:.|.|             .|..:.|.....|                   :|...||:..
 Worm    21 LLLLIVFLALVTVHIKMTIDVAPVFKSDDPLPRGDPDQKPATIDSETQTVDEPRNVCESPECITL 85

  Fly   172 SRQLLLWANTSKSPCHETYEWACGNFASDYANHEYFVIKRGEWNYETYNEYQELNELNRFIAMLP 236
            :.:|..:.:.|..||.:.|:..||.|      :|:..|.:|    ....:...|::|.|...:..
 Worm    86 AHELHNYKDPSVDPCQDFYQHFCGKF------YEHSAIGQG----RMATKRSTLSKLIREFLLKN 140

  Fly   237 NSQEGSVESTVSSLYRSCRETDVLDKSQSDL--LLKRAINAVYGWQAFRDSNRLQSW-------- 291
            .:.....|:|:..:|..|||...:    |||  :..:|:..:     |.|..::.:|        
 Worm   141 KTSTSKSENTMKQVYAKCRELQKI----SDLNSIPPQALLDI-----FSDIKKIGAWPVLDKDWD 196

  Fly   292 -------EYKRVLVVLQAKH-GIFPYYRVTVENGFSNPHDYVITLDEGELGLPDKYFYGNDADEE 348
                   |..|.||.|...| |.|.:      :..:.|  ||:      :..|.|........|:
 Worm   197 GSKFNLNEMLRQLVNLGETHLGFFHF------DFIARP--YVL------IKPPLKQGVQKSVLEK 247

  Fly   349 VVRGYKLLLRDFAINMGIVSREADLFADDIFHYERRIVNHIEDAKADANRPINKLMR-------- 405
            ||   |::|....|.|.....| ||  |:.|....||             .|:||.|        
 Worm   248 VV---KMILEANEIKMDQGFSE-DL--DEYFELSNRI-------------KIDKLPRTSRSIVGL 293

  Fly   406 LADL-KIKAPSLPILESLQAIFPKTK------------ITEDTEVLVRDPEVMHALSVLLSTSDK 457
            |.|: :|....| |||    :.|::|            :|....:.|||.|..|..:::.|||: 
 Worm   294 LPDVRRINFRGL-ILE----MMPRSKMNRFLGTLFQKVVTYHHPLFVRDNETNHLDTIIRSTSN- 352

  Fly   458 KPINNFIVWSLARKMLPHLSKEYRTLAETFDHALYGRTASYPRWLICSKVVRDWLPFAVDALQQQ 522
            :.:.|:::::..     |.|.::.|         :|..:...|   |.|:|...||        :
 Worm   353 RALANYLIFNFI-----HSSIKFLT---------FGLKSDRER---CEKIVVQELP--------R 392

  Fly   523 PPRQQF-ETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLEQAKWLEPAARQFIQKKLNEMRL 586
            |..:.| .....|        ||.|.:..:..:::..:.:.:.::....|:.::.:.||:..:..
 Worm   393 PSLRVFMRNCVDK--------GNREEVAKLTETVKENVLEMIRESDSFTPSVKKRVLKKVEAIGA 449

  Fly   587 QFGIPDEVLQQPTYLAQYYNELIL--NNVFFVEHLEWIWTFRRSQMEKKLGPLAI---LDVIVSE 646
            ..|.||. ...|..|.:.|..|.|  ::.::             :|.:||..|.:   ::.:..:
 Worm   450 IIGYPDH-FDPPGTLDKEYENLTLDASDSYY-------------KMSQKLHQLRLQHQMEFLAGQ 500

  Fly   647 MYTRDNPQAIA----YSNKLNMLLVSKVLISSNYYDYRYPVAVNFARIG 691
            .....:.|.:.    |.:|.|.|.|....:...::|..||..||....|
 Worm   501 TPLSPSDQVLEVNAHYDSKDNALTVLAPFLDDPFFDSTYPEYVNLIFTG 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
goeNP_573160.1 GluZincin 184..>692 CDD:472708 118/557 (21%)
nep-10NP_494532.2 M13 97..709 CDD:341056 118/558 (21%)

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