DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG34325 and pdlim4

DIOPT Version :10

Sequence 1:NP_001097003.1 Gene:CG34325 / 32656 FlyBaseID:FBgn0085354 Length:179 Species:Drosophila melanogaster
Sequence 2:NP_001036161.1 Gene:pdlim4 / 569404 ZFINID:ZDB-GENE-070308-5 Length:349 Species:Danio rerio


Alignment Length:48 Identity:14/48 - (29%)
Similarity:22/48 - (45%) Gaps:0/48 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 CHKCNEVIQLRIITALGKTWHPEHFVCKDCQCPITEASFNINDGQPVC 55
            |.:|...|...|:.|..|.:||:.|:|.||...:.:..:...|....|
Zfish   274 CTRCANGIVGVIVKARDKLYHPDCFMCDDCGLNLKQRGYFFIDDNLYC 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG34325NP_001097003.1 LIM 8..59 CDD:413332 14/48 (29%)
LIM 67..119 CDD:413332
LIM 127..175 CDD:413332
pdlim4NP_001036161.1 PDZ_PDLIM-like 4..82 CDD:467235
DUF4749 146..231 CDD:464948
LIM_RIL 274..326 CDD:188835 14/48 (29%)
Blue background indicates that the domain is not in the aligned region.

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