DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4678 and Cpz

DIOPT Version :9

Sequence 1:NP_001138211.1 Gene:CG4678 / 32652 FlyBaseID:FBgn0030778 Length:527 Species:Drosophila melanogaster
Sequence 2:XP_038948430.1 Gene:Cpz / 83575 RGDID:620496 Length:660 Species:Rattus norvegicus


Alignment Length:499 Identity:178/499 - (35%)
Similarity:251/499 - (50%) Gaps:82/499 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DSMQMQHHQMTAEPGLPE--PRAYMPDAQHLDFVYHDHEELTRFLRATSARYPNLTALYSIGKSI 102
            |.::....::..|..||.  |..:      :.|.:|.:.::.|.|:.|:||...:...||||:|.
  Rat   170 DPLEQLRGELDVEEALPSGLPPTF------IRFAHHSYAQMVRVLKRTAARCSQVAKTYSIGRSF 228

  Fly   103 QGRDLWVMVVSSSPYEHMVGKPDVKYVGNIHGNEPVGREMLLHLIQYFVTSYNT-DQYVKWLLDN 166
            :|:||.|:..||.|.:|.:.:|:||.:|||||||..|||:|::|.||..:.|.. :..::.||:.
  Rat   229 EGKDLVVIEFSSRPGQHELMEPEVKLIGNIHGNEVAGREILIYLAQYLCSEYLLGNPRIQRLLNT 293

  Fly   167 TRIHILPTMNPDGYAV-SKEGTCDGG--QGRYNARGFDLNRNFPD----YFKQNNKRG------- 217
            ||||:||:||||||.| :.||....|  .||.||:..||||||||    |::..:.||       
  Rat   294 TRIHLLPSMNPDGYEVAAAEGAGYNGWTSGRQNAQNLDLNRNFPDLTSEYYRLASTRGVRTDHIP 358

  Fly   218 ----------QPETDSVKDWISKIQFVLSGSLHGGALVASYPYDNTPNSRLLKGICRSSALCAMF 272
                      .|||.::..||..|.||||.|||||.||.|||:|.:.:....|          ||
  Rat   359 ISQYYWWGKVAPETKAIMKWIQTIPFVLSASLHGGDLVVSYPFDFSKHPHEEK----------MF 413

  Fly   273 QTYSAAPSLTPDDDVFKHLSLVYARNHAKMSRGVACKSATPAFENG-ITNGAAWYPLTGGMQDYN 336
                   |.|||:.:||.|:..||..|..|......:......:.| |.|||.||..||||.|:|
  Rat   414 -------SPTPDEKMFKLLARAYADVHPMMMDRSENRCGGNFLKRGSIINGADWYSFTGGMSDFN 471

  Fly   337 YVWYGCMEITLEISCCKFPPAYELKKYWEDNQLSLIKFLAEAHRGVQGFVFDPAGMPIERASIKI 401
            |:...|.|||:|:.|.||||...|...|:.|:..|:.||...|||::|.|.|..|.|::.|.|.:
  Rat   472 YLHTNCFEITVELGCVKFPPEEALYGLWQHNKEPLLNFLEMVHRGIKGVVTDKYGKPVKNARILV 536

  Fly   402 KGRDVGFQTTKYGEFWRILLPGYYKVEVFAEGFAPREVEFVIVEQHPTLLNVTLQPSKRLEG--- 463
            ||......|...|::||:|.||.:.|...|.|::            ..:..||:....:..|   
  Rat   537 KGIRHDVTTAPDGDYWRLLPPGSHIVIAQAPGYS------------KVMKRVTIPLRMKRAGRVD 589

  Fly   464 --IGPMGPGGVPVGGVVGPGGLYRPIP---SPQ------HYRPP 496
              :.|:|.|  |...:.||.   |.:|   .||      .:.||
  Rat   590 FILQPLGTG--PKNFLPGPS---RALPRSLDPQGAPAQLDFEPP 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4678NP_001138211.1 M14_CP_N-E_like 72..377 CDD:199842 135/330 (41%)
Peptidase_M14NE-CP-C_like 381..455 CDD:200604 21/73 (29%)
CpzXP_038948430.1 CRD_FZ 51..178 CDD:413323 1/7 (14%)
M14_CPZ 198..512 CDD:349439 135/330 (41%)
Peptidase_M14NE-CP-C_like 516..592 CDD:200604 23/87 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2649
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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