DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4678 and Cpm

DIOPT Version :9

Sequence 1:NP_001138211.1 Gene:CG4678 / 32652 FlyBaseID:FBgn0030778 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_081744.1 Gene:Cpm / 70574 MGIID:1917824 Length:443 Species:Mus musculus


Alignment Length:469 Identity:195/469 - (41%)
Similarity:274/469 - (58%) Gaps:66/469 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 MPDAQHLDFVYHDHEELTRFLRATSARYPNLTALYSIGKSIQGRDLWVMVVSSSPYEHMVGKPDV 126
            :|....|||.||..|.:..||::.:..|.::|.|:|||||::||:|||:||..:|.||.||.|:.
Mouse    12 LPVVAALDFRYHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWVLVVGQTPKEHRVGIPEF 76

  Fly   127 KYVGNIHGNEPVGREMLLHLIQYFVTSYNTDQYVKWLLDNTRIHILPTMNPDGYAVSKEGTCDGG 191
            |||.|:||:|.||||:|||||.|.|:||..|..:..|:|:|||||:|:|||||:...::..|...
Mouse    77 KYVANMHGDETVGRELLLHLIDYLVSSYRKDPEITHLIDSTRIHIMPSMNPDGFEAVQKPDCYYS 141

  Fly   192 QGRYNARGFDLNRNFPDYFKQNNKRGQPETDSVKDWISKIQFVLSGSLHGGALVASYPYDNTPNS 256
            .||.|...:||||||||.|:.||...||||.::.:|:....||||.:|||||||||||:||    
Mouse   142 NGRENYNNYDLNRNFPDAFENNNVTKQPETLAIMEWLKTETFVLSANLHGGALVASYPFDN---- 202

  Fly   257 RLLKGICRSSALCAMFQTYSAAPSLTPDDDVFKHLSLVYARNHAKMSRGVACKSATPAFENGITN 321
                |:..:..|.:.        |||||||||:||:..||..:..|::|..||:.. .|.|||.|
Mouse   203 ----GVQATGTLLSR--------SLTPDDDVFQHLAYTYASRNPNMTKGDQCKNKR-NFPNGIIN 254

  Fly   322 GAAWYPLTGGMQDYNYVWYGCMEITLEISCCKFPPAYELKKYWEDNQLSLIKFLAEAHRGVQGFV 386
            |.:||||.||||||||:|..|.|||||:||||:|...:|..:|.||:.|||:::.:.|.||:|.|
Mouse   255 GYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPLFWNDNKASLIEYIKQVHLGVKGQV 319

  Fly   387 FDPAGMPIERASIKIKGRD--VGFQTTKYGEFWRILLPGYYKVEVFAEG---------------- 433
            ||.:|.|:....::::.|.  ..|:|.|.||::.:||||.|.:.|...|                
Mouse   320 FDQSGAPLPNVIVEVQDRKHICPFRTNKLGEYYLLLLPGSYVINVTVPGHDSYLTKLTIPGKSQP 384

  Fly   434 FAPREVEFVI-VEQHPTLLNVTLQPSKRLEGIGPMGPGGVPVGGVVGPGGLYRPIPSPQHYRPPV 497
            |:..:.:|.: :...|..::|: .||      .||.|             ||:.:||        
Mouse   385 FSALKKDFHLPLRWQPDSISVS-NPS------CPMIP-------------LYKFMPS-------- 421

  Fly   498 PPYAGAASSDSGIF 511
              ::.|.....|:|
Mouse   422 --HSAATKPSLGVF 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4678NP_001138211.1 M14_CP_N-E_like 72..377 CDD:199842 153/304 (50%)
Peptidase_M14NE-CP-C_like 381..455 CDD:200604 25/92 (27%)
CpmNP_081744.1 M14_CPM 22..310 CDD:349438 153/304 (50%)
Peptidase_M14NE-CP-C_like 314..394 CDD:200604 23/79 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167832329
Domainoid 1 1.000 307 1.000 Domainoid score I1347
eggNOG 1 0.900 - - E1_KOG2649
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35367
Inparanoid 1 1.050 369 1.000 Inparanoid score I2127
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46397
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 1 1.000 - - FOG0000769
OrthoInspector 1 1.000 - - oto92959
orthoMCL 1 0.900 - - OOG6_109920
Panther 1 1.100 - - LDO PTHR11532
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3496
SonicParanoid 1 1.000 - - X6200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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