DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4678 and Cpm

DIOPT Version :9

Sequence 1:NP_001138211.1 Gene:CG4678 / 32652 FlyBaseID:FBgn0030778 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001101568.1 Gene:Cpm / 314855 RGDID:1310532 Length:443 Species:Rattus norvegicus


Alignment Length:400 Identity:188/400 - (47%)
Similarity:252/400 - (63%) Gaps:32/400 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 MPDAQHLDFVYHDHEELTRFLRATSARYPNLTALYSIGKSIQGRDLWVMVVSSSPYEHMVGKPDV 126
            :|....|||.||..|.:..||::.:..|.::|.|:|||||::||:|||:||..||.||.||.|:.
  Rat    12 LPVVAALDFRYHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWVLVVGQSPKEHRVGIPEF 76

  Fly   127 KYVGNIHGNEPVGREMLLHLIQYFVTSYNTDQYVKWLLDNTRIHILPTMNPDGYAVSKEGTCDGG 191
            |||.|:||:|.||||:|||||.|.||||..|..:..|:|:|||||:|:|||||:...|:..|...
  Rat    77 KYVANMHGDETVGRELLLHLIDYLVTSYGKDAEMTRLIDSTRIHIMPSMNPDGFEAVKKPDCYYS 141

  Fly   192 QGRYNARGFDLNRNFPDYFKQNNKRGQPETDSVKDWISKIQFVLSGSLHGGALVASYPYDNTPNS 256
            .||.|...:||||||||.|:.|:...||||.:|..|:....||||.:|||||||||||:||    
  Rat   142 NGRENYNNYDLNRNFPDAFENNSVTKQPETLAVMTWLQTETFVLSANLHGGALVASYPFDN---- 202

  Fly   257 RLLKGICRSSALCAMFQTYSAAPSLTPDDDVFKHLSLVYARNHAKMSRGVACKSATPAFENGITN 321
                |:..:..|.:.        |||||||||:||:..||..:..|::|..||:.. :|.|||.|
  Rat   203 ----GVQATGTLLSR--------SLTPDDDVFQHLAYTYASRNPNMTKGDQCKNKR-SFPNGIIN 254

  Fly   322 GAAWYPLTGGMQDYNYVWYGCMEITLEISCCKFPPAYELKKYWEDNQLSLIKFLAEAHRGVQGFV 386
            |.:||||.||||||||:|..|.|||||:||||:|...:|..:|.||:.|||:::.:.|.||:|.|
  Rat   255 GYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPFFWNDNKASLIEYIKQVHLGVKGQV 319

  Fly   387 FDPAGMPIERASIKIKGRD--VGFQTTKYGEFWRILLPGYYKVEVFAEGFAPREVEFVIVEQHPT 449
            ||.:|.|:....::.:.|.  ..|:|.|.||::.:||||.|.:.|...|.          :.|.|
  Rat   320 FDQSGNPLPNVIVEAQDRKHICPFRTNKLGEYYLLLLPGSYVINVTVPGH----------DSHLT 374

  Fly   450 LLNVTLQPSK 459
            .|.:   |||
  Rat   375 KLTI---PSK 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4678NP_001138211.1 M14_CP_N-E_like 72..377 CDD:199842 156/304 (51%)
Peptidase_M14NE-CP-C_like 381..455 CDD:200604 24/75 (32%)
CpmNP_001101568.1 Peptidase_M14_like 18..310 CDD:299699 159/308 (52%)
Peptidase_M14NE-CP-C_like 314..394 CDD:200604 26/80 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335984
Domainoid 1 1.000 309 1.000 Domainoid score I1290
eggNOG 1 0.900 - - E1_KOG2649
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35367
Inparanoid 1 1.050 368 1.000 Inparanoid score I2075
OMA 1 1.010 - - QHG46397
OrthoDB 1 1.010 - - D101221at2759
OrthoFinder 1 1.000 - - FOG0000769
OrthoInspector 1 1.000 - - oto96514
orthoMCL 1 0.900 - - OOG6_109920
Panther 1 1.100 - - LDO PTHR11532
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6200
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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