DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4678 and Cpxm1

DIOPT Version :10

Sequence 1:NP_001138211.1 Gene:CG4678 / 32652 FlyBaseID:FBgn0030778 Length:527 Species:Drosophila melanogaster
Sequence 2:NP_001099981.1 Gene:Cpxm1 / 296156 RGDID:1306937 Length:722 Species:Rattus norvegicus


Alignment Length:450 Identity:162/450 - (36%)
Similarity:234/450 - (52%) Gaps:64/450 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EPRAYMPDA------QHLDFVYHDHEELTRFLRATSARYPNLTALYSIGKSIQGRDLWVMVVSSS 115
            :|....|:|      ..|||.:|:::.:.:.::..:.:.||:|.:||||||.||..|:||.:|..
  Rat   267 DPNDLFPEAHTLGSSDSLDFRHHNYKAMRKLMKEVNEQCPNITRIYSIGKSHQGLKLYVMEMSDH 331

  Fly   116 PYEHMVGKPDVKYVGNIHGNEPVGREMLLHLIQYFVTSY-NTDQYVKWLLDNTRIHILPTMNPDG 179
            |.||.:|:|:|:||..:||||.:|||:||.|:|:....: ..|..|..||..||||:||:|||||
  Rat   332 PGEHELGEPEVRYVAGMHGNEALGRELLLLLMQFLCREFLRGDPRVTRLLTETRIHLLPSMNPDG 396

  Fly   180 Y--AVSKEGTCDG-GQGRYNARGFDLNRNF---------------------------PDYFKQNN 214
            |  |..|.....| .:||:..:|.|||.||                           |.|:...|
  Rat   397 YETAYHKGSELVGWAEGRWTHQGIDLNHNFADLNTQLWYAEDDGLVPHTVPNHHLPLPTYYTLPN 461

  Fly   215 KRGQPETDSVKDWISKIQFVLSGSLHGGALVASYPYDNTPNSRLLKGICRSSALCAMFQTYSAAP 279
            ....|||.:|..|:.:|.||||.:||||.||.|||:|                   |.:|..||.
  Rat   462 ATVAPETWAVIKWMKRIPFVLSANLHGGELVVSYPFD-------------------MTRTPWAAR 507

  Fly   280 SL--TPDDDVFKHLSLVYARNHAKM--SRGVACKSATPAFENGITNGAAWYPLTGGMQDYNYVWY 340
            .|  ||||.||:.||.|||..:..|  :....|.|...:....:.|||.|:.:.|.|.|::|:..
  Rat   508 ELTPTPDDAVFRWLSTVYAGTNRAMQDTDRRPCHSQDFSLHGNVINGADWHTVPGSMNDFSYLHT 572

  Fly   341 GCMEITLEISCCKFPPAYELKKYWEDNQLSLIKFLAEAHRGVQGFVFD-PAGMPIERASIKIKGR 404
            .|.|:|:|:||.|||...||.:.||:|:.:|:.:|.:...|:.|.|.| ...:.|..|.|.::|.
  Rat   573 NCFEVTVELSCDKFPHEKELPQEWENNKDALLTYLEQVRMGITGVVRDKDTELGIADAVIAVEGI 637

  Fly   405 DVGFQTTKYGEFWRILLPGYYKVEVFAEGF-APREVEFVIVEQHPTLLN--VTLQPSKRL 461
            :....|...|::||:|.||.|.|...|||: ..::...|..|:.|...|  :|..|.:||
  Rat   638 NHDVTTAWGGDYWRLLTPGDYVVTASAEGYHTAKQHCRVTFEEGPVPCNFLLTKTPKQRL 697

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4678NP_001138211.1 M14_CP_N-E_like 72..377 CDD:349431 128/339 (38%)
Peptidase_M14NE-CP-C_like 381..455 CDD:200604 24/77 (31%)
Cpxm1NP_001099981.1 FA58C 106..262 CDD:238014
M14_CPX_like 288..609 CDD:349441 128/339 (38%)
Peptidase_M14NE-CP-C_like 613..689 CDD:200604 24/75 (32%)
Blue background indicates that the domain is not in the aligned region.

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