DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9672 and Prrg2

DIOPT Version :9

Sequence 1:NP_573151.1 Gene:CG9672 / 32651 FlyBaseID:FBgn0030777 Length:253 Species:Drosophila melanogaster
Sequence 2:XP_008757618.1 Gene:Prrg2 / 361570 RGDID:1305444 Length:198 Species:Rattus norvegicus


Alignment Length:71 Identity:20/71 - (28%)
Similarity:26/71 - (36%) Gaps:28/71 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 YNGK----QIRVEEITINPNYSTLKTGIAL------------------LRLQEEITFSETVNAIP 133
            ||||    ::.|..:.:.     |.:||.|                  ||:||. ...||...||
  Rat    98 YNGKGGRGRVDVAGLAVG-----LTSGILLIVLAGLGAFWYLHYRRRRLRVQES-CLQETGLIIP 156

  Fly   134 LSQDVP 139
            ||...|
  Rat   157 LSPPTP 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9672NP_573151.1 Tryp_SPc 24..247 CDD:214473 20/71 (28%)
Tryp_SPc 25..250 CDD:238113 20/71 (28%)
Prrg2XP_008757618.1 GLA 33..96 CDD:214503
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24278
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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