DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9672 and Send1

DIOPT Version :9

Sequence 1:NP_573151.1 Gene:CG9672 / 32651 FlyBaseID:FBgn0030777 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_608662.1 Gene:Send1 / 33407 FlyBaseID:FBgn0031406 Length:255 Species:Drosophila melanogaster


Alignment Length:251 Identity:68/251 - (27%)
Similarity:119/251 - (47%) Gaps:25/251 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LTLTIGLILVAAGVLEAQPQGRIAGGEDAVLGQLPYQAALSIGGSYNCGAVIIGQRYALTALSCV 67
            |.|.:.|::.....:..:|..||.||....:..:|:|.:|...|.:.||..|..:...:||..|:
  Fly     8 LLLAVHLLISPVVPVLLEPSERIIGGSSMDITDVPWQVSLQYYGEHFCGGSIYSKTIIITAAHCI 72

  Fly    68 CSDGKDTPWAAVLFAVTVGSVDLYN--GKQIRVEEITINPNYS--TLKTGIALLRLQEEITFSET 128
             .:|:.        ::..|| .|::  |..:.||...|:|.:.  .::..:|:|:|...::||::
  Fly    73 -KEGER--------SIRAGS-SLHDSGGVVVGVEAYIIHPQFDKHNMENDVAVLKLSSPLSFSDS 127

  Fly   129 VNAIPLSQDVPPMGSQVEVSGWGRTTESEVNMHRTLQIGAAEVMAPR--ECALANRDELLVADDQ 191
            :..|||::..||..|....:||||..    .:.|..|:...|::...  .|.|...:.:...|  
  Fly   128 IQTIPLAETDPPTSSSALATGWGRGN----FLIRPRQLQGVEILIRPLIVCKLKYGNGVFNED-- 186

  Fly   192 VLCLGHGRRQGICSGDIGGPAVYQGQLVGLGAQILGECGGMLPERFISIAANYDWI 247
             :|.|...:.| |.||.|||.|:.|||||:.:: .|....:....:.|:|...:||
  Fly   187 -ICAGRMGKGG-CYGDSGGPLVFNGQLVGITSR-TGNIVCLGSSLYASVARYRNWI 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9672NP_573151.1 Tryp_SPc 24..247 CDD:214473 62/228 (27%)
Tryp_SPc 25..250 CDD:238113 63/229 (28%)
Send1NP_608662.1 Tryp_SPc 29..239 CDD:214473 62/228 (27%)
Tryp_SPc 30..239 CDD:238113 61/227 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D469244at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.