DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4653 and tmprss4a

DIOPT Version :10

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:XP_005157547.2 Gene:tmprss4a / 777630 ZFINID:ZDB-GENE-061103-631 Length:458 Species:Danio rerio


Alignment Length:231 Identity:65/231 - (28%)
Similarity:118/231 - (51%) Gaps:24/231 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AEVGSQPHSISLRRNGVHVCGGALIREKWILTAAHCVSLGGGQQSYPAKSYNVRVGSIQRLTGGQ 95
            |::.:.|..:||:.:|.|.|||:|:...|::|||||.: |.|::   |.|....|..|..|:...
Zfish   230 ADIANWPWQVSLQYSGQHTCGGSLVTPNWVVTAAHCFN-GDGRK---ALSRWTVVSGITYLSSTP 290

  Fly    96 LVPLSKIIIHTNYSSSDAVGSNDLALLELETSVVLNANTNPIDLATERPA--AGSQIIFSGWG-S 157
            ...:.:||:::||..:::  ..|:.:::|::.:.|:.:..|:.|..:...  .|..::.:||| .
Zfish   291 SSYVKEIIVNSNYKPAES--DFDITMIKLQSPITLSESRRPVCLPPQNLGLKGGDGLVVTGWGHM 353

  Fly   158 SQVDGSLSHVLQVATRQSLSASDCQTELYLQQ---EDLLCLSPVDEDFAG---LCSGDAGAPASY 216
            ::..||||.:||.|..|.:.::.|.:......   ..::|...:    ||   .|.||:|.|..:
Zfish   354 AEKGGSLSSMLQKAQIQVIDSAQCSSPTVYGSSITSRMICAGVM----AGGVDACQGDSGGPLVH 414

  Fly   217 NNQ---LVGIAAFFVSGCGSEQ-PDGYVDVTQHLEW 248
            ...   |||:.::.| ||.... |..|.:|.|.|:|
Zfish   415 LADRWVLVGVVSWGV-GCARPGFPGVYTNVDQMLDW 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 65/231 (28%)
tmprss4aXP_005157547.2 None

Return to query results.
Submit another query.