DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4653 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:236 Identity:72/236 - (30%)
Similarity:103/236 - (43%) Gaps:29/236 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AEVGSQPHSISLRRNGVHVCGGALIREKWILTAAHCVSLGGGQQSYPAKSYNVRVGSIQRLTGGQ 95
            ||.|..|..:||:.|.||.|||.||...|:||||||.......|.:.| ::.|...| .||.   
  Rat   192 AETGDWPWQVSLQLNNVHHCGGTLISNLWVLTAAHCFRSYSNPQQWTA-TFGVSTIS-PRLR--- 251

  Fly    96 LVPLSKIIIHTNYSSSDAVGSNDLALLELETSVVLNANTNPIDLATERPAAGSQII------FSG 154
             |.:..|:.|..|:|  ....||:|:::|:..|....|.:.:.|    |||...||      .:|
  Rat   252 -VRVRAILAHAEYNS--ITRDNDIAVVQLDRPVTFTRNIHRVCL----PAATQNIIPDSVAYVTG 309

  Fly   155 WGSSQVDGSLSHVLQVATRQSLSASDCQTELYLQQE---DLLCLSPVDEDFAGLCSGDAGAPASY 216
            |||....|:....||....:.:|:..|.........   .:|| :.|.......|.||:|.|...
  Rat   310 WGSLTYGGNTVTNLQQGEVRIVSSEVCNEPAGYGGSVLPGMLC-AGVRSGAVDACQGDSGGPLVQ 373

  Fly   217 NNQ-----LVGIAAFFVSGCG-SEQPDGYVDVTQHLEWINE 251
            .:.     :|||.::... || ..:|..|..||.:..||.:
  Rat   374 EDTRRLWFVVGIVSWGYQ-CGLPNKPGVYTRVTAYRNWIRQ 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 72/236 (31%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 72/236 (31%)
Blue background indicates that the domain is not in the aligned region.

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