DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4653 and hpn

DIOPT Version :10

Sequence 1:NP_573150.2 Gene:CG4653 / 32650 FlyBaseID:FBgn0030776 Length:254 Species:Drosophila melanogaster
Sequence 2:NP_001091657.2 Gene:hpn / 569259 ZFINID:ZDB-GENE-141212-373 Length:425 Species:Danio rerio


Alignment Length:252 Identity:66/252 - (26%)
Similarity:118/252 - (46%) Gaps:49/252 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 AEVGSQPHSISLRRNGVHVCGGALIREKWILTAAHCVSLGGGQQSYP-----AKSYNVRVGSIQR 90
            |..||.|..:||:.:|||.|||::|.::||::||||         :|     |..:.|.:|||..
Zfish   170 ARQGSWPWQVSLQYDGVHQCGGSIISDRWIISAAHC---------FPERYRHASRWRVLMGSIYN 225

  Fly    91 LTGGQLVPLSK---------IIIHTNY----SSSDAVGSNDLALLELETSVVLNANTNPIDLAT- 141
                  .|:.|         ::.|::|    .::....|.|:|::.|...:.......|:.|.| 
Zfish   226 ------TPIRKNVVIAEVKTVVYHSSYLPFVDANIDDNSRDIAVISLTKPLQFTDYIQPVCLPTY 284

  Fly   142 -ERPAAGSQIIFSGWGSSQVDGSLSHVLQVATRQSLSASDCQTELYLQQE---DLLCLSPVDEDF 202
             :|.|.|.....:|||:.:..|:.::|||.|....:|.:.|....|...:   .:.| :..::..
Zfish   285 GQRLADGQMGTVTGWGNVEYYGTQANVLQEAHVPIISDAVCNGPDYYDNQVTTTMFC-AGYEKGG 348

  Fly   203 AGLCSGDAGAP--------ASYNNQLVGIAAFFVSGCG-SEQPDGYVDVTQHLEWIN 250
            ...|.||:|.|        .:...:|:|:.: :.:||. :::|..|..|::.|.||:
Zfish   349 TDSCQGDSGGPFVAADVLSKTSRYRLLGVVS-WGTGCAMAKKPGVYTRVSRFLPWIS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4653NP_573150.2 Tryp_SPc 30..252 CDD:238113 66/252 (26%)
hpnNP_001091657.2 Hepsin-SRCR 53..160 CDD:462736
Tryp_SPc 164..404 CDD:238113 65/250 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.